Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08450 |
Symbol | |
ID | 4383984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 723065 |
End bp | 724147 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323231 |
Product | hypothetical protein |
Protein accession | YP_788829 |
Protein GI | 116054384 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0000000918861 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGACC AACGCTTCAA GATCGTCTTC TCCGGCGAGC TGATGCCCGA CGCATCGCTC GAAACCGTGA AGGACAATCT CGCCCGCCTG TTCAAGAGCG AACCGGGCAA GATCGACGCC CTCTTCGGCG GTCGCCCGGT GGTGCTGAAA CGCGAACTTC CAGAGGCCGA GGCGGAGCGT TACCTGACCG CCCTGCGCCA GGCCGGCGCC AATGCCTACA AGGAAGTCGA CCTGGCGGCC AGCCTGAGCC TGGTGGAAAC GCCCGATCAC AACCCCCAGG TCGCGGAAGA AACCCCAGCG CAACACCTGC CTCCCATGAC CTGCCCGAAA TGCGGCCATG AACAGCCCAG CGGAGCGGAA TGTTCGGCTT GCGGCATCAT CATCGAGAAG TACCTGGCGC GCCAGGCGCA GCTCGGCGAA AACGCCGCGC CTGCGGCCTC CGCGGCCGCG GGCGCGGGCG CGTCTCCCTA CACACCACCC AGCGCCCAGG TCGGCGAAGC CCTCCCCGAG TTCGGCGAGC TGAACGTGTT CACCACCAAC GGCCGGATCG GACGCCTGCG CTATCTCGGC TGGTCGATGG CGATGACGCT GTGCTTCCTC GTCATCATGG GCCTGGGCTT CCTGCTCGGC GAAACCGTCG GCGTGGCCGT CACCGCCCTG GCCTCGATCG CCTTCATCGT CATTGCCGTG ATGATCGGCG TGCAGCGCCT GCATGACCTC GGCTGGTCGG GCTGGCTCTG GCTGCTCAAC TTCGTCCCCT TCGTCGGCAG CGTGTTCGGC ATCCTGATGC TGGTCCTGCC CGGCAGCACC GGCGCCAACC GCTACGGTCC GCCGCCGCCG GCGAACAGCA CCGGGGTGAA AGTCCTGGCC AGTCTGATCA TCCTGCTGCC GATAGTCGGT ATCATCGCCG CCATCGCCCT GCCGTCCTAC CAGGGTTACC TGGAGCGCGC GAACTATGAC GGCGGCGCCA GCGCTCCAGC CGACCCGTAC ACCACGGACG AGCAGGCCGC CGCAGCGGCG GCCGAAGCCG ATGAAGCCGC CACGGCGGCG GCAGAGGCCA TGGAAGACGA CGACCAACAG TAG
|
Protein sequence | MTDQRFKIVF SGELMPDASL ETVKDNLARL FKSEPGKIDA LFGGRPVVLK RELPEAEAER YLTALRQAGA NAYKEVDLAA SLSLVETPDH NPQVAEETPA QHLPPMTCPK CGHEQPSGAE CSACGIIIEK YLARQAQLGE NAAPAASAAA GAGASPYTPP SAQVGEALPE FGELNVFTTN GRIGRLRYLG WSMAMTLCFL VIMGLGFLLG ETVGVAVTAL ASIAFIVIAV MIGVQRLHDL GWSGWLWLLN FVPFVGSVFG ILMLVLPGST GANRYGPPPP ANSTGVKVLA SLIILLPIVG IIAAIALPSY QGYLERANYD GGASAPADPY TTDEQAAAAA AEADEAATAA AEAMEDDDQQ
|
| |