| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_08240 |
|---|
| Symbol | |
|---|
| ID | 4383965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 703411 |
|---|
| End bp | 705246 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639323212 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788810 |
|---|
| Protein GI | 116054365 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0000139555 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGA ATACCGACGG CAGCCTGACG CTCGACCTGG TCCTTCGCAG CGAAGGGTAC
AGGGCCGGGA TGGACAAGGT TGGCAGGATC AACGATCAGA AAATGCGTGC CATGGAGGCG
CGCGCGGAAA AGGCTGGCAA GGCTATCGGC AAAAGCCTGG ACAGTTCGGC ACTGATTGCC
AGCAGCGTGC TGGACCAGGC GCTGGACATG CTGGGCAGGA CCAGTCGCCA GGCGGGTCAG
GCCAAGAAGC CTGTGCAGAG CGCCCAGGAC AAAGTACTGG CCGAGTGGAA GACCCGGCAG
AAGGAGCTGG GCGAAGCCTG GAAGAGCTAT CGCGAACCAC TCCAGGATCT GTCCAAGCTC
AACGAAGCAC TACTGAAGAA CTCTTCCGAC AAGCTCGACA AGGCGCTGCT CAATCTCAGC
GAGACCGGCC AGCTGTCGCT TGCCAACGTG GGCAAGGCCG CCTACGCCGA TGCCGCGCGC
CTCGCCTCGC GGCAGATGAC GCTGATGCTG CTGGACGGGC TGTTTGGCTG GGTCGCCAGC
GTCGGTACCG AGAAGCCCAA GGTCGACGAC AAGGCGGGCA AGGGACAGGC GAAGGCCGGC
GACGACGAGA AGGAACAGCC GTCGCTCCAG TCGCAGGTCT TCAAGCAGTG GCTGTTGCAG
ATGAACAGTG TCTGGGGCGC CTACCGCGCG CCGCTGCAGG ATATCTCCGG GATGACCGAC
GAGCTGTTCA GAAATGCGTC GGAGAAGCTC GAGAAGTCGC TGTTCAATTT CGCCACTAGC
GGAAAGCTGT CCTTGAGCAA CTTCGCCAAG ACGGTGATCG ACGATGTCGC CCGGATCGCC
GCGCGGCAGC TTTCAATGCT CGCCCTGGAC GGATTGTTCG GCTGGATGAA TGGCAAGGCC
GGCATCACCG AGGCGCAACT GGCCAGCCAG AAACCCTATA CCTCGCTACT GGAAAAGGCC
CGCGCAGCTG CGGGACAAGC GGTAGCGGGC GCTCCCGCGG CCCAGGGTGC CGCGCCAATG
CCGGCAGCGG CGATGGATGT CGGCGCGATG GTGGCCACTG CTTCCGGGCA GACCGGGGAC
GGTTCCAAGG TCTCGGCTGG AGGGGCTTCG GCCGCTGGCA AGCCGGTGGG CAGTTGGGTC
GAACAGATGG ACGCCTCCTG GGCGAGCCTG CGCGACCAGG CGCAGGACGT CTCGGGAATG
ATGGACATGC TGTTTACCAA CGCCTTCACC AATATGGAGA ACGCCCTGTT CACCTTTGCC
ACCACGGGCA AGCTGTCGTT CAAGGATTTC GCCGACTCGG TGATCCAGGA TATGGCGCGG
ATCGCCGCGC GGCAGGCGAC GCTGCAGATC ATCGGCGGCA TCGTCGGTGC GGTCAGCGGG
TTCTTCGGTA GCGGCGCAAC GGCGGGCTCG CGGATTTCCG ACTACACCGG CTCGGACATG
GCCAATTGGG TCAGCAAGCA ACGCGCCGGA GGCATGCCTG GGTTCGCCAG GGGCGGTGCC
TTCAACGATG GCATCCAGAG CGCGCCGGCG CTGTTCAGCA TGGCCGGCGG TCGTCCGGCG
CTGATCGGCG AGCGTGGGCC GGAAGCCATC ATGCCGCTGA GTCGCGGTTC CGATGGCGTG
CTCGGCGTGC GCGCGCTCGG CGGCGGCGAG GGGGGCAACG TCTTCAATTT CTCCACCAGC
GTCAGCCTGG GCGGCGGCCG CGAGGGCGCG GCGACGGCCA GCGGCGACGA CGGTACGGGA
CAGCAGCTGG CGGGAATGAT CAACGATGCC GCGCGCAACG TGGTGGCGCA GGAGCTGCGC
CCCGGCGGCC TGGTATGGAG GATGGTGAAT GGCTGA
|
|---|
| Protein sequence | MATNTDGSLT LDLVLRSEGY RAGMDKVGRI NDQKMRAMEA RAEKAGKAIG KSLDSSALIA
SSVLDQALDM LGRTSRQAGQ AKKPVQSAQD KVLAEWKTRQ KELGEAWKSY REPLQDLSKL
NEALLKNSSD KLDKALLNLS ETGQLSLANV GKAAYADAAR LASRQMTLML LDGLFGWVAS
VGTEKPKVDD KAGKGQAKAG DDEKEQPSLQ SQVFKQWLLQ MNSVWGAYRA PLQDISGMTD
ELFRNASEKL EKSLFNFATS GKLSLSNFAK TVIDDVARIA ARQLSMLALD GLFGWMNGKA
GITEAQLASQ KPYTSLLEKA RAAAGQAVAG APAAQGAAPM PAAAMDVGAM VATASGQTGD
GSKVSAGGAS AAGKPVGSWV EQMDASWASL RDQAQDVSGM MDMLFTNAFT NMENALFTFA
TTGKLSFKDF ADSVIQDMAR IAARQATLQI IGGIVGAVSG FFGSGATAGS RISDYTGSDM
ANWVSKQRAG GMPGFARGGA FNDGIQSAPA LFSMAGGRPA LIGERGPEAI MPLSRGSDGV
LGVRALGGGE GGNVFNFSTS VSLGGGREGA ATASGDDGTG QQLAGMINDA ARNVVAQELR
PGGLVWRMVN G
|
|---|
| |