Gene PA14_08030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08030 
Symbol 
ID4385494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp690096 
End bp690983 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID639323193 
Productputative phage baseplate assembly protein 
Protein accessionYP_788791 
Protein GI116054346 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000117482 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00024186 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCATCG ATCTTTCCCA GTTGCCGGAG CCAGAGGTTA TCGAAAACCT CGATTTCGAG 
ACGATTTACC AAGAGCTGTT GGGCGACTTC CGCGAAGCCA TGGCTGGCGA ATGGACAGCG
GAGGTGGAGT CGGATCCGGT TCTCAAGCTT CTGCAACTGG CGGCCTATCG AGAACTGCTG
CTGCGGGCGC GGATCAACGA TGCGGCGCGG GCGGTGATGC TGGCATACGC CAGCGGTGCC
GATCTCGACC AGATCGGTGC CGGCTTCAAT GTGCAGCGTT TGCTGATCAG GCCCGCTCAG
CCCGAGGCGG TACCGCCGGT GGAGGCGCAG TACGAGAGCG ACAAGTCGCT GCGCAATCGC
ATCCAGCTCG CGTTCGAGCA GCTATCCGTC GCAGGACCGC GGAACGCCTA TATAGCCCAT
GCGCTGGGCG CGGATGGAAG GGTGGCGGAT GCCTCTGCGA CCAGTCCGGC GCCCTGCGAA
GTGCTGATCA GCGTGCTCGG GGTGGAAGGC AACGGGCAGG CACCGGAAGC GGTGTTGCAG
GCAGTGCGCC TGGCGCTGAA CGCGGAGGAC GTGCGTCCTG TCGCGGATCG GGTAACGGTG
CGCTCGGCAG GAATCGTTCC CTATCAGGTC AAGGCGCAGC TCTACCTGTT TCCCGGCCCC
GAGGCCGAGC TGATCCGTGC CGCCGCCGAG GCTTCGCTGC GCGACTACAT TTCCGCCCAG
CGCCGCCTGG GCCGCGACAT CCGGCGTTCG GCCCTGTTCG CCACCCTGCA TGTCGAAGGC
GTGCAGCGCG TCGAACTGCA GGAGCCTGCG GCCGACGTGG TCCTGGATGA AACCCAGGCG
GCCTATTGCA CGGGGTACGC GATCACCTTG GGAGGCGTCG ATGAGTAG
 
Protein sequence
MIIDLSQLPE PEVIENLDFE TIYQELLGDF REAMAGEWTA EVESDPVLKL LQLAAYRELL 
LRARINDAAR AVMLAYASGA DLDQIGAGFN VQRLLIRPAQ PEAVPPVEAQ YESDKSLRNR
IQLAFEQLSV AGPRNAYIAH ALGADGRVAD ASATSPAPCE VLISVLGVEG NGQAPEAVLQ
AVRLALNAED VRPVADRVTV RSAGIVPYQV KAQLYLFPGP EAELIRAAAE ASLRDYISAQ
RRLGRDIRRS ALFATLHVEG VQRVELQEPA ADVVLDETQA AYCTGYAITL GGVDE