| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06720 |
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| Symbol | nirF |
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| ID | 4383882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 586475 |
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| End bp | 587653 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639323086 |
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| Product | heme d1 biosynthesis protein NirF |
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| Protein accession | YP_788686 |
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| Protein GI | 116054242 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.729227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC GTCCCCTCGC GCCGCTTTTC CTCGCCCTGC TCGCCGGCTG TAGCCAGCAG
CCGCCCTTGC GCGGCAGCGG CGACCTCGGC GTGCTGATCG AACGCGCCGA CGGCAGCGTG
CAGATCCTCG ACGGCACGGC GAAGACCTCG CTGGCGCGGG TCGAAGGCCT CGGCGACCTG
TCCCACGCCT CCCTGGTGTT CTCCCGCGAC CAGCGCTACG CCTACGTATT CGGTCGCGAC
GGCGGCCTGA CCAAGCTCGA CCTGCTGGCC CAGCGCATCG ACAAGCGCCT GATCCAGGGC
GGCAACAGCA TCGGCGGAGC GATCAGCCAG GACGGTCGGC TGGTCGCGGT ATCCAACTAC
GAGCCGGGCG GGGTCAAGGT GTTCGACAGC CGCACCCTGG AGCTGGTCGC CGAGATTCCC
GCCACCCGCC TCCCCGGCCA GGACAGGAAC TCCCGGGTGG TCGGCCTGGT CGACGCGCCC
GGGCAGCGCT TCGTGTTCAG CCTGTTCGAC AGCGGCGAGA TCTGGATCGC CGACTTCAGC
CAGGGCGACA CGCCGCACCT GACCCGCTTC CGCGATATCG GCAAGCAACC CTACGACGCC
CTCATCAGTC CCGACGGGCG CTACTACATG GCCGGGCTGT TCGGCGAGGA CGGCATGGCC
CAGCTCGACC TCTGGCACCC GGAGCGCGGC GTCAGGCGCG TACTCGGCGA CTACGGCCGC
GGCCAACGCA AGCTGCCGGT GTACAAGATG CCGCACCTGG AGGGCTGGAC CATCGCCAGC
GACCAGGCCT TCGTCCCGGC GGTCGGCCAT CACCAGGTGC TGGTGCTCGA CGCGCGCGAC
TGGAAGCAGA CCGACGCCAT CGACGTCGCC GGCCAGCCGG TGTTCGTCAT GACTCGACCG
GACGACCGGC AGATCTGGGT CAACTTCGCC TACCCGGACA ACGACAAGGT GCAGGTCATC
GACAGCGAGA CCCACGAAGT GATCGAAACC CTGCGCCCTG GCCCCGGCGT ACTGCACATG
GAATTCAGCG GGCGCGGCGA CCAGGTCTGG ATCTCGGTGC GCGACGCCGA CCAGTTGCAG
GTCTGGGACC CGTACCGCCT GAAGCGCATC GGCAGCCTTC CGGCCCGCAG CCCGAGCGGC
ATCTTCTTCA GCCACCGCGC CCAGCACATC GGACTCTAG
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| Protein sequence | MNLRPLAPLF LALLAGCSQQ PPLRGSGDLG VLIERADGSV QILDGTAKTS LARVEGLGDL
SHASLVFSRD QRYAYVFGRD GGLTKLDLLA QRIDKRLIQG GNSIGGAISQ DGRLVAVSNY
EPGGVKVFDS RTLELVAEIP ATRLPGQDRN SRVVGLVDAP GQRFVFSLFD SGEIWIADFS
QGDTPHLTRF RDIGKQPYDA LISPDGRYYM AGLFGEDGMA QLDLWHPERG VRRVLGDYGR
GQRKLPVYKM PHLEGWTIAS DQAFVPAVGH HQVLVLDARD WKQTDAIDVA GQPVFVMTRP
DDRQIWVNFA YPDNDKVQVI DSETHEVIET LRPGPGVLHM EFSGRGDQVW ISVRDADQLQ
VWDPYRLKRI GSLPARSPSG IFFSHRAQHI GL
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