Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_06670 |
Symbol | nirJ |
ID | 4383877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 583410 |
End bp | 584573 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639323081 |
Product | heme d1 biosynthesis protein NirJ |
Protein accession | YP_788681 |
Protein GI | 116054237 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.196876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGGA TCAGCCATTA CCTGCGCAGC CTCGCCGAGG ACGCGCCGGC GCCGCGCCGC GCCGGCGGCA GGCGCGCCCC GGTGGTGATC TGGAACCTGC TGCGGCGCTG CAACCTGACC TGCAAGCACT GTTACTCCAC CTCCGCCGAC AGCGACTTCC GTGGCGAGCT GGAGACCGCG GAAATCCTTC GCGGCATCGA CGACCTGCGC GCCGCCGGAG TGCGCGTGCT GATCCTCTCC GGCGGCGAAC CGCTGATGCA CCCGGACCTC TTCGAGATCG CCGCCCATGC GCGCCAGGCC GGGATGTTCG TGGCGCTGTC GAGCAACGGT ACGCTGATCG ACGAAGGCAA CATCCAGCGC GTCGCCGAGG CCCGCTTCGA CTACGTCGGC ATCAGCCTCG ACGGCCTGCG CGAGACCCAC GACCGCTTCC GCCAGAAGCA GGGCAGCTTC GACGCCGCGC TGGCGGCCAT GCGCCTGTGC CGCGAGGCGG ATATCCGCGT CGGCATGCGC ACCACCCTGA CCGAGGAGAA CGCCGCGCAA CTACCGGCAC TGCTCGACCT GATGCGCGAA CTCGACGTGC AGAAGTTCTA CCTCTCGCAC CTCAACTACA GTGGCCGCGG CCGCCGCAGC CGCGCCCTCG ACGCCCACCA CCGGCGCACC CGCGAGGCCC TCGCGCTGCT CTTCGAACGG GCCGACGAGG ACATCCGGCA GGGGCGCGAC AGCGACTTCG TCACCGGCAA CAACGACGCC GACGCGATCC TTCTCCTCGA CTGGCTCAAG CGCCGCCGCC CGCAGCAATT GGCGCGTCTC TGCGAGCTGC TGCTGGACTG GGGCGGCAAC GCCTCGGGCG AGGGCATCGC CAACATCGAC AACACCGGCG AGGTGCATCC GGACAGCTAC TGGTGGCACC ACAGCGTCGG CAACATCCGC CATCAGCGCT TCGCCGACTT CTGGTTCGAG CGCCCCGACC CGCTGCTCCT GCAACTGCGC CAGCGCCCGC GACCGGTGGT CGGGCGCTGC AGCCAATGCC GCTGGCTGGA CATCTGCAAC GGCAACACCC GCACCCGCGC CTGGGCCGGC GGAGAACTCT GGGGCGAAGA CCCCGGCTGC TACCTCAGCG ATCAGGAAAT CGGCCTCGAG CGCATCGCGC TGCACGCCGT CTAA
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Protein sequence | MLRISHYLRS LAEDAPAPRR AGGRRAPVVI WNLLRRCNLT CKHCYSTSAD SDFRGELETA EILRGIDDLR AAGVRVLILS GGEPLMHPDL FEIAAHARQA GMFVALSSNG TLIDEGNIQR VAEARFDYVG ISLDGLRETH DRFRQKQGSF DAALAAMRLC READIRVGMR TTLTEENAAQ LPALLDLMRE LDVQKFYLSH LNYSGRGRRS RALDAHHRRT REALALLFER ADEDIRQGRD SDFVTGNNDA DAILLLDWLK RRRPQQLARL CELLLDWGGN ASGEGIANID NTGEVHPDSY WWHHSVGNIR HQRFADFWFE RPDPLLLQLR QRPRPVVGRC SQCRWLDICN GNTRTRAWAG GELWGEDPGC YLSDQEIGLE RIALHAV
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