Gene PA14_04340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_04340 
Symbol 
ID4383738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp388412 
End bp389683 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content72% 
IMG OID639322903 
Producthypothetical protein 
Protein accessionYP_788503 
Protein GI116054060 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTC TGCTGGTAGG CGCGGGAGGT TTCGTCGGGC GGCACCTGCT CCCGGCGCTG 
CTCGCCGCCG GACACGAACT GCTCCTCACC GCGCGCCGCC CGCCGGTCGA TGCGCCTGCC
GGCGTACGCT GGCTGGCGCT CGACCTGGAG CGGCTTGCGG AAAGGCCGGA CAGCTTCGCC
TGGCCCGCCG GGGTCGACCT GCTGATCAAC GCCGCCGGCA CCATGAGCCT CGACGAGGCG
AGCATGGCTC GCGTCCAGGA CAGCGGCGCG CGAGCACTCT TCGACCTCGC TGCGGCCCAT
GGGGCGAAGG TCCTGCAGAT TTCCGCGCTG GGCGCCGGTG CGCACCCGGA CGTGACCTTC
CTCGCCAGCA AGGCGGCGGC CGACCGCCAC CTGCTGGAAC TGGGCATCCC GGCGCTGGTG
CTGCGCCCGT CCCTGCTGCT GGGGCCGGGC GGCGCCAGCA GCGCCTGGCT GGAACGCCTG
TCGCCGCTAC CGCTGATTCC CTTGCTGGAC AATCGCGCGC GCCTGCAACC GCTGCATGTC
GAGGACCTGG TCGGCGCGGT GCTGGCCTTG CTGCGCTGCT GGCCGGAGCG GGCGCAGGTG
ATTCCGCTGG TGGGTCCGCA GGCGCTGACC CAGGGCGAGC TGCTGGACGA GCTGCGCCGC
GCCCAGGGTT GGCCGCGCGG CCGCTATGTG GTGCCGCCCG CGGCGCTTCT CGATGCGTTG
GGCGGGCTTG GCCGGCGTGC TGGCTGGCGG ACACTGAGTC CATCGATGCT GAAGCTGGTG
CGCCACGACA ACCTGGCCGA CCCGGCACTC CTCGATGCGG CCTGCGGCTA TCGTTGCGCG
CCGCTGGCCA GTCGGCTGCT CGGCTGGCCG CAGGCGGCAC GCAGCCTGGC GGCTCTGATG
CGGCCGCTGA TGCTGGCGGC CCTGGTGCTG ATCTGGCTGG GTACCCTGGT CGCCTGCCTG
GGGCCGGGTT ACGGCTGGGG CCTGCGGATC CTCGGCGAGG CCGGCATCCA CGGCTGGCCG
GCGAGCCTGG CGGTGATCGC CGGGGCCCTG CTCGACGGCG CGCTCGGCGT CGGCCTGCTG
CTCCGCCGCT GGCGTCGGCG CGCGCTGCTG GCGCAGTTCT GGCTGATGCT TGGCTACAGC
CTGGCGATCA GCCTGATCCT GCCGCACTAC TGGTACGACC CCTACATGGC GGTCGGCAAG
AACATCGTGC TGATGGTGGC CACGCTCTGG CTGCTGGGCG ACGAACCTCG AGCCAAGGAG
GCCCGTGGAT GA
 
Protein sequence
MRILLVGAGG FVGRHLLPAL LAAGHELLLT ARRPPVDAPA GVRWLALDLE RLAERPDSFA 
WPAGVDLLIN AAGTMSLDEA SMARVQDSGA RALFDLAAAH GAKVLQISAL GAGAHPDVTF
LASKAAADRH LLELGIPALV LRPSLLLGPG GASSAWLERL SPLPLIPLLD NRARLQPLHV
EDLVGAVLAL LRCWPERAQV IPLVGPQALT QGELLDELRR AQGWPRGRYV VPPAALLDAL
GGLGRRAGWR TLSPSMLKLV RHDNLADPAL LDAACGYRCA PLASRLLGWP QAARSLAALM
RPLMLAALVL IWLGTLVACL GPGYGWGLRI LGEAGIHGWP ASLAVIAGAL LDGALGVGLL
LRRWRRRALL AQFWLMLGYS LAISLILPHY WYDPYMAVGK NIVLMVATLW LLGDEPRAKE
ARG