Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_03470 |
Symbol | |
ID | 4384326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 316965 |
End bp | 318164 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639322836 |
Product | hypothetical protein |
Protein accession | YP_788436 |
Protein GI | 116053994 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 1.20054e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTGCCG CGAAAAAGGC CCCCGTCATC CTGATTGCCG ACCCGGACCC CTGGAGTCGC GACTTGCTTG GCCAACTGGT CCTCGGCGTG CGTTGCGATG CCCGGCTGGT CCTCTGCGGC GATGGCGGGG AAGCGCTGGC GCATTGCCGG CGCCGGCGCT TCGCGTTGAT CCTGGCCGAG CTGAACCTGC CGCAGGTGGA TGGCTTCGAG CTGCTGCGCG AAGCGCGCCT GCGCCGCTCG GTCGCCGAGC AGCCGTTCAT CCTGATCAGC GACCGCGCCG ACCAGGCCAG CGTGCGCGCC GCCGTGGCAC TGGCGCCGAC CGCCTACCTG GTGAAGCCGT TCCAGGCCGA GAACCTGATG CAACGCCTGC GAGGGTTGTT GCTGAAGGGC GACGAAGTGG TCGCCTGTCC GCTGCCGGAG CGGGACGCGG GCGAGAACCT GGAGGCTTTC CTCGAACGCG CGCGCGACTC CGCGGAGGGG GCGCCGTTGC TGGCCGACGT GCGTGCCGCC AGCGATCGTT GCCTGAGCGC CGAGGAGCAT CCGCTGCGCG TGCTGGAGGA TGAGTTCGGT CGCGACCCGC AGATCACCGC TGGCCTGATC GCCGCCGCCA ACAGCGCCGC CCGGCACGTC GGTCCGGCCT GCCAGACCCT GGGCCAGGCC CTGCGGCGGC TGGGACTCGG GCACAGCCTG AACCTGGTGC TCGGTTTCAG TCTGCAGCGG GCCATCCAGC TCGGCGAGCC GCTGCTGGCC GAGCGCGCCA TGCACTTCTG GGATCTTTCG CAACGTTGCG CGGACATCGC CTGGGAACTG GCCGACGCCC TCGGCGCGGA CGTCGAGCGC TGCTATACCG CAGGGCTGCT GCATCGCCTG GGCGACCTGG CGCTGCTGCG GACATTGCAG GATTGGTGCG ATGGCGGCGG CGCGCTGGAC GAGGCGCGGC TCGACGAGCT GCTGGGGCGT TTCGGCGCCA GCTTCGGCTC GGCCCTGCGG GCGCGTTGGC GGCTGCCGCT GGAGCTGCGC CGGCTGATCG CTGCGGCGTA CCAGTTCGGT GGCGTGCTTT CCCGCGAAGA GCTGATCCTC AGCCTGGCGA CCCAGGCCGC CAGCCTGCCC GAGGACGACG CGGAGCAACT GGCCGAGAGC AAGGCTGCCC GCATGCTCGG CCTGGACGGC GAACGACTGG CGAAACTGCT GCAGCCCTGA
|
Protein sequence | MSAAKKAPVI LIADPDPWSR DLLGQLVLGV RCDARLVLCG DGGEALAHCR RRRFALILAE LNLPQVDGFE LLREARLRRS VAEQPFILIS DRADQASVRA AVALAPTAYL VKPFQAENLM QRLRGLLLKG DEVVACPLPE RDAGENLEAF LERARDSAEG APLLADVRAA SDRCLSAEEH PLRVLEDEFG RDPQITAGLI AAANSAARHV GPACQTLGQA LRRLGLGHSL NLVLGFSLQR AIQLGEPLLA ERAMHFWDLS QRCADIAWEL ADALGADVER CYTAGLLHRL GDLALLRTLQ DWCDGGGALD EARLDELLGR FGASFGSALR ARWRLPLELR RLIAAAYQFG GVLSREELIL SLATQAASLP EDDAEQLAES KAARMLGLDG ERLAKLLQP
|
| |