| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02550 |
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| Symbol | mdcA |
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| ID | 4383600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 227383 |
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| End bp | 229047 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639322758 |
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| Product | malonate decarboxylase alpha subunit |
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| Protein accession | YP_788359 |
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| Protein GI | 116053921 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000992861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CGATCTCTCC CCCGCCGCAG TGGTCGCGGC GCCGCCAGGA AAAGCAGCGG
CGCCTCGAGC GCGTGCGCGG CCTGGCCGAC GGCGCGGTGC TGCCGCGCGA ACGCCTGGTC
GCCGCGCTGG AGGCGCTGAT CGCGCCGGGC GATCGGGTGG TGCTGGAAGG CAACAACCAG
AAGCAGGCGG ACTTCCTCTC CCGTTCGCTG GCGCGGGTCG ATCCCGGCAA GCTGCACGAC
CTGCACATGA TCATGCCCAG CGTCGGTCGT CCGGAGCATC TCGACCTGTT CGAACTGGGC
ATCGCGCGCA AGCTCGACTT CTCCTTCTCC GGCCCGCAGA GCCTGCGCAT CGGCCAGTTG
CTCGAAGACG GCCTGCTGGA GATCGGCGCG ATCCACACCT ACATCGAGCT GTACGCGCGG
CTGGTGGTCG ACCTGATCCC CAACGTCGCA CTGGTCGCCG GTTTCGTCGC CGACCGCGAA
GGCAACGTGT ACACCGGGCC GAGCACCGAA GACACCCCGG CGCTGGTGGA GCCCACCGCG
TTCAGCGACG GCATCGTCAT CGTCCAGGTC AACCGTATCG TCGACGACCC GCGCGACCTG
CCGCGAGTGG ACATCCCGGC GTCCTGGGTG GACTTCGTGG TCGAGGCCGA CCAGCCGTTC
TACATCGAGC CGCTGTTCAC CCGCGACCCG CGCCACATCA AGCCGGTCCA CGTGCTGATG
GCGATGATGG CGATCCGCGG CATCTACCAG CGGCACAACG TGCAGTCGCT GAACCACGGC
ATCGGCTTCA ACACCGCGGC CATCGAGCTG ATCCTGCCGA CCTACGGCGA GTCCCTCGGC
CTGAAGGGCA AGATCTGCCG GCACTGGACC CTCAACCCGC ACCCGACCCT TATCCCCGCC
ATCGAGAGCG GCTGGGTCGA GAGCGTGCAC TGCTTCGGCA CCGAGCTGGG CATGGAGGGC
TACATCGCCC AGCGTCCCGA CGTGTTCTTC ACCGGTCGCG ACGGCTCGCT GCGTTCCAAT
CGGATGTTCT GCCAACTGGC CGGGCAGTAC GCGGTAGACC TGTTCATCGG CGCCACCCTC
CAGGTCGACG GCGACGGCCA TTCCTCCACC GTCACCCGCG GACGCCTGGC CGGCTTCGGC
GGCGCCCCGA ACATGGGCCA CGACCCGCGC GGCCGGCGCC ACTCGACGGC GGCCTGGCTG
GACATGCGGG GCGAACCCGA GGCCTTGCTG GAGCGCGGCA GGAAGCTGGT GGTGCAGATG
GTCGAGACCT TCCAGGACGG CGGCAAGCCG ACCTTCGTCG AGCGTCTCGA CGCGCTGGAG
GTGGCGCGCC AGACCGGCAT GCCGCTGGCG CCGGTGATGA TCTATGGCGA CGACGTCACC
CATGTGCTCA CCGAGGAAGG CATCGCCTAC CTGTACAAGG CGCGCTCGCT GGAGGAACGC
CAGGCGATGA TCGCCGCGGT GGCGGGGATC AGTCCGATCG GCCTGCGCCA CGATCCGCGC
GAGACCCAGC GGATGCGCCG CGAAGGGCTG ATCGCGCTGC CCGAGGACCT CGGCATCCGC
CGCACCGACG CCTCGCGCGA GCTGCTGGCG GCGAAGAGCA TCGCCGAGCT GGTCGAGTGG
TCCGGCGGGC TGTACCAGCC GCCGGCGCGT TTCAGGAGCT GGTGA
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| Protein sequence | MTTPISPPPQ WSRRRQEKQR RLERVRGLAD GAVLPRERLV AALEALIAPG DRVVLEGNNQ
KQADFLSRSL ARVDPGKLHD LHMIMPSVGR PEHLDLFELG IARKLDFSFS GPQSLRIGQL
LEDGLLEIGA IHTYIELYAR LVVDLIPNVA LVAGFVADRE GNVYTGPSTE DTPALVEPTA
FSDGIVIVQV NRIVDDPRDL PRVDIPASWV DFVVEADQPF YIEPLFTRDP RHIKPVHVLM
AMMAIRGIYQ RHNVQSLNHG IGFNTAAIEL ILPTYGESLG LKGKICRHWT LNPHPTLIPA
IESGWVESVH CFGTELGMEG YIAQRPDVFF TGRDGSLRSN RMFCQLAGQY AVDLFIGATL
QVDGDGHSST VTRGRLAGFG GAPNMGHDPR GRRHSTAAWL DMRGEPEALL ERGRKLVVQM
VETFQDGGKP TFVERLDALE VARQTGMPLA PVMIYGDDVT HVLTEEGIAY LYKARSLEER
QAMIAAVAGI SPIGLRHDPR ETQRMRREGL IALPEDLGIR RTDASRELLA AKSIAELVEW
SGGLYQPPAR FRSW
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