| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01940 |
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| Symbol | |
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| ID | 4383556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 176167 |
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| End bp | 177318 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639322713 |
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| Product | putative RND efflux membrane fusion protein precursor |
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| Protein accession | YP_788314 |
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| Protein GI | 116053877 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.34804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACG CCAGAGGCGC TTTTCATTCC AAAGGTCGCT GGTCGCGGAT GGCGCTGCCC
GCCATCCTGT GCGCCAGCCT GCTTGTCGGT TGCGGCGCCG AGCCGCCCGC CGAGGAACAC
GTCCGTGTGC TGGCGCAGAC GGTGAAGATG GCCGAGTTCG CCTCGGCCAC CTCGATCACC
GGCGACATCC AGGCACGGGT ACAGGCCGAC CAGTCGTTCC GTGTCGGCGG CAAGATCGTC
GAGCGCCTGG TCGATGTCGG CGACCACGTC GCGGCTGGCC AGGTGCTGGC GCGGCTCGAC
CCGCAGGACC AGCGCAGCAA CGTGGAGAAC GCCCAGGCGG CGGTCGCCGC GCAGCAGGCG
CAGTCGAAGC TCGCCGACCT CAACTACCAG CGGCAGAAGG CGCTGCTGCC CAAGGGCTAC
ACCAGCCAGA GCGAGTACGA CCAGGCGCTG GCCTCGGTGC GCAGCGCGCA GAGTTCGCTG
AAGGCCGCCC AGGCGCAGTT GGCCAACGCC CGCGACCTGC TTTCCTATAC CGAGCTGCGT
GCCTCCGACG CCGGGGTCAT CACCGCCCGC CAGGCCGAGG TCGGCCAGGT GGTGCAGGCC
ACCGTGCCGA TCTTCACCCT GGCCCGCGAC GGCGAGCGCG ACGCGGTGTT CAACGTCTAC
GAGTCGTTGT TCAGCCACGA TGTCGACGGC CAGCGGATCA CCGTCAGCCT GCTCGGCAAG
CCGGAAGTCA CCGCCAGCGG CAAGGTCCGC GAGATCACCC CGACGGTGGA CGAGCGCAGC
GGTACGCTGA AGGTCAAGGT CGGCCTCGAC TCGGTGCCGG CGGAAATGAG CCTCGGCAGC
GTGGTCAACG CCAGCGTCGC CGCGCCGGCC GCGCACAGCG TGGTGCTGCC CTGGTCGGCG
CTGTCCAAGG TCGGCGAGCA GCCGGCGGTC TGGTTGCTCG ATCAGGAAAG CAAGGTGCGC
CTGCAACCGG TGCGGGTGGC ACGCTACGCC AGCGAGAAGG TGGTCATCGA CGGTGGCCTG
GAGGCGGGCC AGACAGTGGT CACGGTGGGC GGCCAACTGC TCCATCCGGG CCAGGTGGTC
GAGGTGGCCC AGCCGCCGCA GCCGACCCAG AGCACCGCCA GCCGCGACGC CGTGGGCGGA
GGCCAGCCAT GA
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| Protein sequence | MSDARGAFHS KGRWSRMALP AILCASLLVG CGAEPPAEEH VRVLAQTVKM AEFASATSIT
GDIQARVQAD QSFRVGGKIV ERLVDVGDHV AAGQVLARLD PQDQRSNVEN AQAAVAAQQA
QSKLADLNYQ RQKALLPKGY TSQSEYDQAL ASVRSAQSSL KAAQAQLANA RDLLSYTELR
ASDAGVITAR QAEVGQVVQA TVPIFTLARD GERDAVFNVY ESLFSHDVDG QRITVSLLGK
PEVTASGKVR EITPTVDERS GTLKVKVGLD SVPAEMSLGS VVNASVAAPA AHSVVLPWSA
LSKVGEQPAV WLLDQESKVR LQPVRVARYA SEKVVIDGGL EAGQTVVTVG GQLLHPGQVV
EVAQPPQPTQ STASRDAVGG GQP
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