Gene PA14_01790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_01790 
Symbol 
ID4383545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp164072 
End bp164590 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content72% 
IMG OID639322702 
Productputative nucleoside 2-deoxyribosyltransferase 
Protein accessionYP_788303 
Protein GI116053866 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0615526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.544037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TCTACCTGGC CGGGCCGGAC GTCTTCCGCC CCGACGCCGA GGCCCACGGC 
GAAATGCTCA AGGCGCTCTG CGCCGAGTTC GGTTTCCTCG GCCTCTATCC GCTCGACCAC
GCCCTGCCCG CCGACATCCG CGAGCCGGCC GCCCAGGCCG CCTGGGTCTA CCGCGCCAAT
GTCGGCCTGA TCGAGCGCGC CGACTGCGTG CTGGCCAACC TCGAACCGTT CCGCGGCAGC
GAGCCGGACA GCGGCACCGC CTTCGAAGTG GGCTACGCCC TGGCCCTGGG CAAGCCGGTA
TATGCCTACC TCAGCGATGC CGGCGCCTAC GCCGAGCGCC TCGCCCGGCT GGCCCCGGAA
TGGCTCGGCG AGCGCCCCGG CGAGGACCGC GACGGTTGGC AACTGGAGGG TTTCGGCCTG
CCATTGAACC TGATGCTGGC GGTGCCTTCG CGGCTGGTCG CCGGCGGTCC GCGCGAGGCC
CTGCGACGCC TCGCCGAGGA ACTCGGCGGG AACGCCTGA
 
Protein sequence
MTAIYLAGPD VFRPDAEAHG EMLKALCAEF GFLGLYPLDH ALPADIREPA AQAAWVYRAN 
VGLIERADCV LANLEPFRGS EPDSGTAFEV GYALALGKPV YAYLSDAGAY AERLARLAPE
WLGERPGEDR DGWQLEGFGL PLNLMLAVPS RLVAGGPREA LRRLAEELGG NA