| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6587 |
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| Symbol | |
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| ID | 4315491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1277311 |
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| End bp | 1278474 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638154431 |
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| Product | muconate and chloromuconate cycloisomerases |
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| Protein accession | YP_778465 |
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| Protein GI | 115361328 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.98653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCC CACACGCAGC GCACCCCATG TCCCCGATCA CCATCGAACG CATTGAAACC
CGCCTCGTCG ACCTGCCGAC GATCCGTCCG CACAAGCTGT CGGTCGCCAC CATGCATGGC
CAGACGCTGA TGCTGGTGAA GGTGCTCTGC AGCGACGGCG TGACCGGCCT CGGCGAAGGC
ACGACGATCG CCGGGATGGC CTACGGCCCG GAAAGCCCCG AAGCGATGAA GCTCGCGATC
GACGCGTACC TCGCGCCGGC GATCATCGGC CAGGACGCGA CGCGCATCCA GACGCTGATG
GCGTTCCTCG GCAAGCTCGC GAAGGTCAAT CACTTCGCGA AGAGCTCGCT CGAAACCGCG
CTGCTCGACG CGCACGGCAA GCGTCTGGGC GTACCGGTCA GCGAACTGCT CGGCGGTCGC
CGGCGTGATC GCCTGCCGGT CGCCTGGACG CTCGCATCGG GCAACACGGC GACCGATATC
GCCGAGGCCG AGCGGATGCT CGACCTGCGC CGTCACAACG TATTCAAGCT GAAGATCGGC
GCGAAGGCGC TCGCCGATGA CATCCGGCAC GTGGCCGAGA TCAAGCGGGC GCTCGGCGAG
CGCGCATCGG TGCGCGTCGA CGTGAACATG GCGTGGAGCG AAACGCAGGC GGCGCGCGCG
ATTCCGGCGC TGGCCGATGC CGGTTGCGAA CTGGTGGAGC AGCCGGTGGC GTCGGCCGCG
GCGCTCGCGC GGCTGATGCG CCGCTTCCCG GTCGCGCTGA TGGCCGATGA AATCCTGCAG
GGCCCGGACA GCGCGTTCGA GATCGCGAAG CATCACGGCG CGGACGTGTT CGCGATCAAG
ATCGAGCAGA GCGGCGGCCT CTTTGCCGCG CAGCGCGTCG CGGCGATCGC GGATGCAGCC
GGCATCGAGC TGTACGGCGG CACGATGCTC GAAGGCGCGT TCAGCACGGT CGCGTCCGCG
CATCTGTTCG CGAGCTTCGC GAACCTGCAG TGGGGCACCG AACTGTTCGG ACCGCTACTG
ATCACCGAAG AAATTCTCAC GACCCCGCTC GACTACAGCG ATTTCGAATT GACCGTGCCG
AGCGGCCCGG GCCTCGGCAT CGAACTCGAC GAAGCGAAGA TCGCGCGCTT CACCCGCGAC
GGGCTGACGA AAGTCTCCCG CTAA
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| Protein sequence | MNSPHAAHPM SPITIERIET RLVDLPTIRP HKLSVATMHG QTLMLVKVLC SDGVTGLGEG
TTIAGMAYGP ESPEAMKLAI DAYLAPAIIG QDATRIQTLM AFLGKLAKVN HFAKSSLETA
LLDAHGKRLG VPVSELLGGR RRDRLPVAWT LASGNTATDI AEAERMLDLR RHNVFKLKIG
AKALADDIRH VAEIKRALGE RASVRVDVNM AWSETQAARA IPALADAGCE LVEQPVASAA
ALARLMRRFP VALMADEILQ GPDSAFEIAK HHGADVFAIK IEQSGGLFAA QRVAAIADAA
GIELYGGTML EGAFSTVASA HLFASFANLQ WGTELFGPLL ITEEILTTPL DYSDFELTVP
SGPGLGIELD EAKIARFTRD GLTKVSR
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