| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6578 |
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| Symbol | |
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| ID | 4315482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1267289 |
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| End bp | 1268398 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638154422 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_778456 |
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| Protein GI | 115361319 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.845685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGGC GTCGCCTCGC TCTCCTCGCA GTCGCTTCCG CACTGCCGCT CGCGCTAGCC
GCGTGCAGCG GAAAAGCGCC TTCCGATCCG CGCACGGAAG CGCCGCTCGT GCGTACCGCC
GTCGTCCAGG CGGCCGTTCC CGCGTCGCGC GCGTTTACCG GCACCGTTGC CGCCCGCGTG
CAAAGCGACC TCGGGTTCCG GGTGTCCGGC AAGGTGCAGG AGCGGCTCGT CGACGCCGGT
CAAACCGTCC GGCGCGGCCA GCCGCTGATG CGGCTCGACC CCGTCGACCT GAAGCTCGCG
GCGCGCGCAC GCGACGAGGC CGTGGCCGCC GCGCGGGCCC GCGCGCGGCA GACCGCCGAG
GACGAAGCCC GCTACCGCGA CCTGCGCGGC ACCGGAGCGA TATCGGCATC GGCCTATGAC
CAGATCAAGG CGGCGGCCGA TGCCGCCAAG GCGCAACTGA GTGCCGCCGA GGCCGACGCG
AACGTGTCGC GCAATGCGAC AGGCTATGCG GAACTCGTCG CGGACGGCGA CGGCGTCGTG
ATGGAAACCC TCGCCGAGCC CGGTCAGGTG GTCAGCGCGG GCCAGCCGGT GGTGCGGCTC
GCGCACGCCG GCAGCCGCGA GGCCGTAATC CAGTTGCCCG AAACCCTGCG CCCGGCGATC
GGGTCGAGCG CGCAGGCCGA GCTGTTCGGC AAGCAGGACG TGAGCGTTCC CGCGACGCTG
CGCCAGCTCT CCGATACCGC GGATACCAGA ACGCGCACGT TTGAAGCGCG TTATGTGCTG
CAGGGTGCGT TAGCCGGCGC ACCGCTGGGT GCGACCGTGA CGATCCGGAT CGCGGACGGC
TCACCGCAAA CCGGCCTGCA GGTGCCGATC GGCGCGCTGC TGGACGCCGG CAAGGGGCCC
GGCGTGTGGG TCGTCGCCGG CGATCCGGCG AAGGTGGCGT GGCGGCCGGT CAATCTCGAG
CATCTGGACG ACGACAGCGC CCGCGTGTCC GGCGCGCTGA AGCAAGGCGA GCGGGTCGTC
GCACTCGGCG CCCACTTGCT GCGCGAAGGC GAAACGGTCC GCGTGTCGCC GCAGGCCGTC
GCGGTCGCAA GCGAAGGAGC ACGACCGTGA
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| Protein sequence | MVRRRLALLA VASALPLALA ACSGKAPSDP RTEAPLVRTA VVQAAVPASR AFTGTVAARV
QSDLGFRVSG KVQERLVDAG QTVRRGQPLM RLDPVDLKLA ARARDEAVAA ARARARQTAE
DEARYRDLRG TGAISASAYD QIKAAADAAK AQLSAAEADA NVSRNATGYA ELVADGDGVV
METLAEPGQV VSAGQPVVRL AHAGSREAVI QLPETLRPAI GSSAQAELFG KQDVSVPATL
RQLSDTADTR TRTFEARYVL QGALAGAPLG ATVTIRIADG SPQTGLQVPI GALLDAGKGP
GVWVVAGDPA KVAWRPVNLE HLDDDSARVS GALKQGERVV ALGAHLLREG ETVRVSPQAV
AVASEGARP
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