| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6560 |
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| Symbol | |
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| ID | 4315464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1245401 |
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| End bp | 1246783 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638154404 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_778438 |
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| Protein GI | 115361301 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.21193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG CGACCCTGTT CCCGTTGTCC ATTCATGAGC GATTCCGCGT CGTGCTGCGC
CGCGCGTTCA CGCCGGGACG ACGCGGTGCG TGGGCGCTGC CGGTAGCTAT TCCGCTCCCA
TACGCGGCCG CAGCATCTAC GGAGCTTGCA CCGCCCACCA TCACCCGCGC CGGCGACGGC
AACGCCGACA GCGGCCACGG CGGGCGCACC GGAGCCGGCC GCCACGACGA ACGCGACACC
GATGCGCCGG GCGGCGGCGG GGGCGACGGC CATCCGCACG ACGATCGCGG CGGCCGCACC
GGCGGCGATG GCGACGGCGG CAACGGCGCA GGTGAAGGCG AACGCAAGCG ACCGGGCAAG
AAGCCGTTGA TCATCCTCGG CGCGGTGGCG GTCGTGCTGG TGATCGCGGG GCTCGTGTGG
TGGCTCGCGA CGCGCAATCA GGAAAGCACC GACGATGCAT ACACGGACGG CAACGCGGTG
GCCGTTGCGC CGCATGTCTC CGGCTACGTG ACACGGCTCG CCGTCGACGA CAACACCTAC
GTGCACCGCG GCGACGTGCT GGTCGAGATC GATCCGCGCG ACTACCGTGC GCAGGTCGAC
GCGGCGCGCG CGCAACTCGG CCTCGCGCAG GCGCAGCTCG ATGCGTCGCG CGTGCAGCTC
GACATCGCGC ACGTGCAATT CCCGGCCCAG TACAAGCAGG CGCGTGCCCA GATCGAATCG
GCGGAAGCCG CGTACCGGCA GGCGCTCGCC GCGCAGGAGC GGCAGCGTGC GGTCGATGCG
CGCGCAACCT CGCAGCAGGC GATCGACGCG GCCGACGCGC AGCGGGCGAG CGCCGATGCG
AACGTCGCGA TGGCGCAAGC CCAGGCGCGC ACCGCGAGCC TCGTGCCGCA GCAGATCCGC
CAGGCCGAAA CGGCCGTCGA GGAGCGTCGC CAGCAGGTAC TGGCGGCACG TGCGCAACTC
GATACGGCGA ACCTCAACCT GTCGTACTGC GAAGTGCGCG CACCGTCCGA CGGCTGGGTC
ACGCGCAGGA ACGTTCAACT CGGCTCGTAC CTGCAAGCCG GCGCGTCGGT CTTCTCGGTC
GTCACGCCGC GCGTATGGAT CACTGCGAAC TTCAAGGAAT CCCAACTGGA GCGGATGCGC
ATCGGCGATC GCGTCGACGT GTCGGTCGAC GCGTATCCCG ATCTCGATCT GCACGGTCAC
GTCGACAGCA TCCAGCTCGG CAGCGGCGCG CGCTTCTCCG CGTTTCCGGC CGAGAACGCG
ACCGGCAACT TCGTGAAGAT CGTGCAGCGC GTGCCCGTGA AGATCGTGCT CGACGGTCCG
CTGCCGAACA ATCCGCCGCT CGGTCTCGGC CTGTCGGCCG AACCGACCGT GCACCTGAAA
TGA
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| Protein sequence | MPDATLFPLS IHERFRVVLR RAFTPGRRGA WALPVAIPLP YAAAASTELA PPTITRAGDG
NADSGHGGRT GAGRHDERDT DAPGGGGGDG HPHDDRGGRT GGDGDGGNGA GEGERKRPGK
KPLIILGAVA VVLVIAGLVW WLATRNQEST DDAYTDGNAV AVAPHVSGYV TRLAVDDNTY
VHRGDVLVEI DPRDYRAQVD AARAQLGLAQ AQLDASRVQL DIAHVQFPAQ YKQARAQIES
AEAAYRQALA AQERQRAVDA RATSQQAIDA ADAQRASADA NVAMAQAQAR TASLVPQQIR
QAETAVEERR QQVLAARAQL DTANLNLSYC EVRAPSDGWV TRRNVQLGSY LQAGASVFSV
VTPRVWITAN FKESQLERMR IGDRVDVSVD AYPDLDLHGH VDSIQLGSGA RFSAFPAENA
TGNFVKIVQR VPVKIVLDGP LPNNPPLGLG LSAEPTVHLK
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