Gene Bamb_6538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6538 
Symbol 
ID4315442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1226032 
End bp1226742 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID638154382 
ProductMgtC/SapB transporter 
Protein accessionYP_778416 
Protein GI115361279 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGA TGCCGGTCGT ACTTCACTGG ACCGATGCCC TCTTCAGGAT CGCGCTGGCG 
CTCGTGGCGG GCGGGCTGGT CGGCCTCGAT CGCAGTGAAG CCGGCAAGAC GGCCGGGCTG
CGCACGACGA TCCTTGTCTG CCTCGCCGCG TGCCTGGCGA TGCTGCAGGT GAATGCGCTG
CTGATGCAGG CCGGCAAGCC GGAGGGCGCG TTTGCGGTGA TCGACCCGAT GCGGCTGCCG
CTCGGCATCC TGACCGGGAT GGGCTTCATC GGCGGGGGTG CAATTCTGCA TCGCGACGGC
CTCGTCTCCG GCGTGACCAC GGCAGCGACG CTGTGGTTCG TCACGGTGAT CGGACTGTGC
ATCGGCGGCG GCCAGTTGTC GCTCGGCGCG CTCGGGCTCG TGCTCGCATT GCTCGTCGTG
TGGCCGCTGC GGTTGGTCGA GGAAAGGCTG CGCGGCGTCA GGACGGCGCG GGTCACGGTC
GAATACGAAC TCGGCTCGAC GGCGCGCGAG CGGCTGACGA CCCGGCTGCA CGCCGCGGGA
TTCACGTGCC GCACGCGCGG CTTTCACGAA TCGGTCGCGC GTGCGCTGCG CGAGGAGGAA
CTGCTCGTGC AGTGGCGCGA GCAGGCCAAC ACCGACGTGA TGCTGCCGCA ACTGATCCGG
ACTCTCGAGT CGGCCGGGCT GACGTCGGTC CGTTGTTCAT CGGAGAACTG A
 
Protein sequence
MEPMPVVLHW TDALFRIALA LVAGGLVGLD RSEAGKTAGL RTTILVCLAA CLAMLQVNAL 
LMQAGKPEGA FAVIDPMRLP LGILTGMGFI GGGAILHRDG LVSGVTTAAT LWFVTVIGLC
IGGGQLSLGA LGLVLALLVV WPLRLVEERL RGVRTARVTV EYELGSTARE RLTTRLHAAG
FTCRTRGFHE SVARALREEE LLVQWREQAN TDVMLPQLIR TLESAGLTSV RCSSEN