| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6486 |
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| Symbol | |
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| ID | 4315390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1162103 |
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| End bp | 1162969 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638154330 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_778364 |
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| Protein GI | 115361227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.737576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGAG AGATCCTTTC GCGATGTGTG ATGCTGTTCG GCATCGACCA TATCGTTCGC
GTGTTGCTAT GGCGCGATCG AGTGGCGATC CTGCTCTACC ACGACCCCGA TCCGGCGACG
CTGGATCGGC ACCTCACCTA CCTGAAAACC ATCTGCGATC TCGTGCCGCT CGACGCACGC
GGTTTGCCGG GGAACGGGCG TCCGCGCGCG GCCATCACGT TTGACGACGG ACTGGCGGGG
AATGCCCGCC TGCTGCCGAT CTTCATCAAG CACCAGGTGC GGCCGACGAT TTTCCTGTGC
AGCCGCATTG TCTGCCGGCC GCGCAGACAC TGGTGGTTGC ATCCCGCCGC GGAGCGGCTT
GGCGTCGAGC GCCTGAAGCG CCTCGCGAAC GATCAACGCC TCGCCGAGCT ACGTGTGCAC
GGCTTTGACC AGGATGGCGA CGACGAGCCG ACAGGGCTGA ACCTGCAACA GCTCGAAGCG
ATGCGCCCAT TCGTGGATTT TCAGGCGCAT ACGCGCTTTC ACCCGATACT GACGCGCTGC
GGCGACAGCG AATGCAAAGC GGAAATCATC GAATCCCGGC GTGAAGTCGA GGCGTTGACC
GGCAACCGTT GCGAACACTT CGCCTATCCG AACGGCAATT ACGGCAAGCG GGAAATCAAT
CTGCTGAAGG CGGCGGGGTA CAAGAGCGCG CGAACCTGCG ATGTCGGCTG GAACGATCAC
CGTAGCGACG CGTTTCGTCT GAAAACCATC ATCATCGACG ATCGCGCATC GCTCCGGTGG
TTCATCTGCA ATTTGACGGG CATCCCGCCG TTTTTGGGTT ATCTGCGCAA GGGCGGCGGT
TTGCGCGGGC ATTTTCCCCA GTTCTGA
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| Protein sequence | MLREILSRCV MLFGIDHIVR VLLWRDRVAI LLYHDPDPAT LDRHLTYLKT ICDLVPLDAR
GLPGNGRPRA AITFDDGLAG NARLLPIFIK HQVRPTIFLC SRIVCRPRRH WWLHPAAERL
GVERLKRLAN DQRLAELRVH GFDQDGDDEP TGLNLQQLEA MRPFVDFQAH TRFHPILTRC
GDSECKAEII ESRREVEALT GNRCEHFAYP NGNYGKREIN LLKAAGYKSA RTCDVGWNDH
RSDAFRLKTI IIDDRASLRW FICNLTGIPP FLGYLRKGGG LRGHFPQF
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