| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6461 |
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| Symbol | |
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| ID | 4315365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1089978 |
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| End bp | 1090850 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638154305 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_778339 |
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| Protein GI | 115361202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.357265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC TGGCTCCCCG CTGGCCGGAC GCGAAGCGCG CGTGCGTCGC GCTCGCGTTC
GATCTCGACG GCCCGACCGG CGACGCGATG CTGAACGGGT CGATCTGGCG CAACCCCGCG
TATTTCACGC TCGGCAGCTA CGGGCCGTGG CGCGCGCTCG GACGGCTGCT CGACATGCTT
GCGTCGTTCG GCCTGCCCGC GACGTTCTTC GTGCCCGCGT GGGTCGCGCG CACCTGGCCC
GACCAATGCG CGGCCATCGT CGAGCGCGGC CACGAGATCG GATATCACGG TTACCGGCAC
GAAGCGTTCT GGGCGCTCGA GCCCTGGCGG CAGCGCGAGA TCATGGCACA GTCGGCCGAC
ATCTTCGAGC GCACGCTCGG CGTGCGGCCG GTCGGGTTCC GCACACCGTC GGGTGACTGG
AGCGACGCGA CGGTGGCTGT GCTGCGCGAA GCGGGCGTGC GCTATTCGAG CTCGATGCGG
GGCGACGACC GTCCGTACCT GCTGCCCGGC GCGGACGGCG AGCCGCCGCT CGTCGAGATT
CCCGGCCGCT GGGAGACCGA CGATTACGCG TCGCTTGCGT ATCACCGCAA CCCCGACTAT
CCGGCGGGGC TCGACCGGAT CGCCGGCTAC GACGCGACGC TCGACAACTG GACGCGCGAA
TTCGACGGGA TATACCGCGA AGGGCTGTGC CTGACGACGC TGCTTCATCC GAAAGTCTGC
GGCAAGCCGG GGCGCATCGC GCTGCTGGAG GCGTGGCTCG GCCACATGTG CGCGCAGGAT
GGCGTGTGGT TCGCGCGCTG CCGCGACGTG GCCGACTGGT GGCTCGCGCA GCACGCGCAC
GGCGCGCAAC CCACGCACCG GAGCGACATG TGA
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| Protein sequence | MTDLAPRWPD AKRACVALAF DLDGPTGDAM LNGSIWRNPA YFTLGSYGPW RALGRLLDML
ASFGLPATFF VPAWVARTWP DQCAAIVERG HEIGYHGYRH EAFWALEPWR QREIMAQSAD
IFERTLGVRP VGFRTPSGDW SDATVAVLRE AGVRYSSSMR GDDRPYLLPG ADGEPPLVEI
PGRWETDDYA SLAYHRNPDY PAGLDRIAGY DATLDNWTRE FDGIYREGLC LTTLLHPKVC
GKPGRIALLE AWLGHMCAQD GVWFARCRDV ADWWLAQHAH GAQPTHRSDM
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