Gene Bamb_6436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6436 
Symbol 
ID4315340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1066480 
End bp1066944 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content57% 
IMG OID638154280 
ProductAsnC family transcriptional regulator 
Protein accessionYP_778314 
Protein GI115361177 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.527241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC TTGACAATTT CGACCTCGGA ATCCTGCGCG AGCTCGCCAG TGATGGACGA 
CTCAGCGGAC GAGAACTCGC GGAGCGCATA GGCCTGTCGT TGACGCCGAC AGTACGTAGG
CTGCGCAGGC TTGAAGAAGA AAATTACATC GAGGGGTATG GTGCCCATTT GAACGAGCAG
CGACTAGTGG GCTCGATTAG CGTCTTCGTG TCCGTCACGC TGGAGAAGCA ATCAGAGGCG
GTTATCGCGA GGTTCGAGAG CGTCGTCGCA CAGTGCCCCG AAGTGATGAG CTGCTTTTTG
ATGAGCGGCG ATGCCGACTA CAACCTGCGC GTGGTCGTAA AGGATCTAGT GGCCTACCAC
GATTTCCTCA CCCGTACCTT GACGCGCATT CCTGGTGTCG CGCATATCAG GTCCAGCTTC
GCCCTTAGAA CGGTACTGAT GCGCCCTGCG CCGCTGCTAA AGTAG
 
Protein sequence
MDELDNFDLG ILRELASDGR LSGRELAERI GLSLTPTVRR LRRLEEENYI EGYGAHLNEQ 
RLVGSISVFV SVTLEKQSEA VIARFESVVA QCPEVMSCFL MSGDADYNLR VVVKDLVAYH
DFLTRTLTRI PGVAHIRSSF ALRTVLMRPA PLLK