| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6425 |
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| Symbol | |
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| ID | 4315329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1052569 |
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| End bp | 1053795 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638154269 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_778303 |
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| Protein GI | 115361166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.630318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCG TATTTCAACA TTGCAAAAAT CCGTCCTGGC TCGATGCCGC AAAGGCGGAT
CGGGCTGCGG CGGCCGTCGA GAACCTCGGT GAGTGGCGCA TGGCAGTGAA GGAGATTCAC
AGCTGGCCCG AGTATGAGTC ACAGCCGTTG CACTCGCTCG ATAGTCTTGC GGCGCAAACG
AATGTGGCGA AGATCTACTA TAAGGACGAG AGCCAGCGCT TTGGTCGTGG TATGGGCAGT
TTCAAGGCTC TGGGCGCCCC GTATGCGGTA TTTTGCATTC TGGCAGACGC TGTAGAGAAG
AAGACCGGTA CGCGTCCGAC ATCGGACGAT CTTCGGAGCG GCAAGTACCG GGAAATTACG
GAGCGTGTCA CGGTTACTGT CGCGACGGAC GGAAACCAGG GGCGCGGTCT GGCCTATGCG
GCGAAAGCGT TCGGTTGCCG CTGTGTTGTC TATATCCACG AACACGTCAG CCCGGGCAGG
AAAGAGGCCA TGGAGGCGCT TGGCGCCATT GTGATTCGCA TTCAGGGCGA ATACGAGGCA
TCCGTGGGGC GTTCGCGCAG CGACGCGAAG AACAACGGAT GGCATTTCGT GTCGAGCACC
TCGTGGGACG ACTACGCTTC CGGCTCACCG CGCGATGTGA TGAATGCGTA TATGGTGCTC
GTGGACGAGG CGCTGCAACA GCTGCCCGAT CCGAAAGCGA TCACGCATAT TTTTGTTCAG
GGTGGCGTCG GCAGCATCGC CGCTGCGATT TTCCTGCGCT TCTACCAGGA ACTCGATGGC
GCTGCGCCTC GCATGGTGAT GGTCGAGCCG AATGAAGCCG ATTGTTTGTA TCAAAGCGCA
TTCAACCGCA CGCCGACTCC GTCCGCCGGA TCGCTGCACA CCATCATGGC TGGGCTGGCA
TGCCGTGAGG TTTCTCCGGC CGCCTGGGCA CTGCTCGATT GGCTCGGCAG CGATTTCGTT
ACGATCCCCG ATTCGTGGGC AGAAGATGCC ATGCGCGCGT TGGCAGCCGG TAACGGAGAC
AGCCCGATTG TGTGTGGTGA AACCGCGGCG GGAGGGACTG CTGTGGTTCT GAAGGCCAAG
GAACTCCCCG AACTCCGCGA GGCGCTGGGC CTTGACAAGC AGAGCCAGAT TTTGCTGTTT
GGTCTCGAGG GCGCAACGGA CCCGACTATC TATGAGCAGA TCGTTGGACG ATCGGTAGCC
GACGTTTTCG ACGGCGTCGC ACGATAA
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| Protein sequence | MNPVFQHCKN PSWLDAAKAD RAAAAVENLG EWRMAVKEIH SWPEYESQPL HSLDSLAAQT
NVAKIYYKDE SQRFGRGMGS FKALGAPYAV FCILADAVEK KTGTRPTSDD LRSGKYREIT
ERVTVTVATD GNQGRGLAYA AKAFGCRCVV YIHEHVSPGR KEAMEALGAI VIRIQGEYEA
SVGRSRSDAK NNGWHFVSST SWDDYASGSP RDVMNAYMVL VDEALQQLPD PKAITHIFVQ
GGVGSIAAAI FLRFYQELDG AAPRMVMVEP NEADCLYQSA FNRTPTPSAG SLHTIMAGLA
CREVSPAAWA LLDWLGSDFV TIPDSWAEDA MRALAAGNGD SPIVCGETAA GGTAVVLKAK
ELPELREALG LDKQSQILLF GLEGATDPTI YEQIVGRSVA DVFDGVAR
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