Gene Bamb_6415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6415 
Symbol 
ID4315319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1041318 
End bp1042202 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content59% 
IMG OID638154259 
ProductHpcH/HpaI aldolase 
Protein accessionYP_778293 
Protein GI115361156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAT CTACGCTGTC CCCTTCCGAG CGCGCGCCTC GAGACTCGAG CGACCAGCGA 
CTGCTGGAAA GTGCGACGTC TTTTCTGTTC GTCCCTGGCG ATCGCCCCGA GCGTTTCCCG
AAAGCGCTGC AGAGCGACGC AAATGTCGTC ATCATCGACT GGGAGGCCTC GGTCATAGCG
TCCAGCAAGA ACGTCGCAAG ACACAACACA ATCGCTTTCC TCGCTAACTC GGACGGCCGT
CGAGTAGCCA TCCGCGTCAA TCCCGTGAGT AGCAGCGACT TCCATCTTGA TGCCGCGGCG
TTGCACCGGA TCTCCGGTCA AATCGCTGGC GTATTTCTGA CCATGGTCGA TTCGGCGGAT
CAAGTGACCA TGGCCCAGGA GGCACTTCCC CCCAACACGA CGCTTGTCGG AATGATTGAG
ACGGCCCGAG CGGTGGTCCG TGTCGACGAA ATCGCGTCTG CGCAGCCACT CTGCCGTCTT
GCATTTGGCA ACATGGACTA TCAGACCGAC GTCGACCTCC CGCCCGACGA GCACGTCGGC
CTGATATATC CGAGCTCGAG AATCGTTGTG GCTTCGCGTT CTGCCGGCCT GCCTGCCCCA
ATCGCCGGCG TCACCGAAAA TATTGCCGAT CTGGATGTGT TCGAACACTC TGCTCGCTTC
GAACGCAACC TCGGGTTCCT CGGCAAGCTT TGCGTCCATC CAACTCAGCT CGCGTTGACA
CAAGCGATCT TCGCTCCCTC TGCAGCCGAA ATCGAATGGG CCGAGAGAGT CATTACCGCA
ACGCAAAATA CGCACGCGGT CATGATGGAT GGCCGCATGA TTGACCGACC GGTTATCGAA
CGGGCGAGGA AGATTCTGAA TCGCGCGAAA GTGGTTCTCG ACTGA
 
Protein sequence
MKQSTLSPSE RAPRDSSDQR LLESATSFLF VPGDRPERFP KALQSDANVV IIDWEASVIA 
SSKNVARHNT IAFLANSDGR RVAIRVNPVS SSDFHLDAAA LHRISGQIAG VFLTMVDSAD
QVTMAQEALP PNTTLVGMIE TARAVVRVDE IASAQPLCRL AFGNMDYQTD VDLPPDEHVG
LIYPSSRIVV ASRSAGLPAP IAGVTENIAD LDVFEHSARF ERNLGFLGKL CVHPTQLALT
QAIFAPSAAE IEWAERVITA TQNTHAVMMD GRMIDRPVIE RARKILNRAK VVLD