| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6413 |
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| Symbol | |
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| ID | 4315317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1038928 |
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| End bp | 1039497 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638154257 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_778291 |
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| Protein GI | 115361154 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.53225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC TTCGATTGGA ACGCCGCGCC GCAGTTGCAC ACCTGCTTGA TGACAGGAAG
GAATCGATCG TCGTCGCGGG CCTGGGATCA CCGATCTACG ATGTCTTTGC GGCGGGCGAT
CATTCGCTCA ATTTCTACGA CTGGGGCGCG ATGGGCTCAG CAGCCATGGT GGGCCTCGGT
CTCGCCCTTG CACAGCCGCG GCGTCCCGTC ATCGTATTCA CCGGCGACGG CGAGATGCTC
ATGGGCCTGG GTGCATTTGC GACGATCGCT CAACATTGCC CGCCGAACCT CGCAATCGTC
GTGCTCGACA ACGAACAGTA TGCGGAAACG GGAATGCAGC GTACCGCGAC AGGCATCGGA
ACTGATCTGG CTGCAGTGGC CCGGGGCTGT GGGCTCAAGA ATGCGGTCAC GCTTACCTCG
GACAGCGAAT TGACATTGCT GAAGGAGAAA ATTCAGGCGT GCGATGGCAC GAAAGTCGCG
GTCCTGAAGA TCGTACCGGG TGACCAGCCG AGAACGATTC CGATGCGGGA TGGTGCAGCG
ATCGCAAACC GCTTCATTCT CGCTCTGTAG
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| Protein sequence | MNELRLERRA AVAHLLDDRK ESIVVAGLGS PIYDVFAAGD HSLNFYDWGA MGSAAMVGLG
LALAQPRRPV IVFTGDGEML MGLGAFATIA QHCPPNLAIV VLDNEQYAET GMQRTATGIG
TDLAAVARGC GLKNAVTLTS DSELTLLKEK IQACDGTKVA VLKIVPGDQP RTIPMRDGAA
IANRFILAL
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