| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6411 |
|---|
| Symbol | |
|---|
| ID | 4315315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 1036693 |
|---|
| End bp | 1038174 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638154255 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_778289 |
|---|
| Protein GI | 115361152 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.599394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAT TTGAAAACTT TATCGATGGT AGGCGCGTTC CGTCAGCGTC CGGGAAGTGG
TTGCCGAGTC TTGACCCATA TCGTAACGAG ACGTGGTGCG AGATCCCGGA TAGCACCGCA
GAGGACGTCG ATGCGGCGGT GAAGGCTGCG CGTGCCGCAT TCCTGTCACC GTCCTGGGCC
GGAGCGTCGG CGACCGCGCG GGGCGCGATG CTTCGTCGAC TCGGAGACTT GATCACTGAG
AACGCGCAGC GGCTCGCGGA GATCGAGGTT CGAGACAACG GAAAGCTTCT GAGCGAGATG
TTGATTCAAC TGCGTAATCT CCCACAGTGG TACTACTACT ATGGTGGCCT CGCGGACAAA
ATCGAAGGCA GTGTCTTGCC GATCGAGAAG AAGGATCACT TCGTTTACAC GACGTGGGAA
CCGCTCGGCG TTGTGGCTGC CATTACGGCG TGGAACTCCC CGTTGCTGCT GCTGACCTGG
AAGCTGGCGC CGGGGCTTGC CGCGGGCAAT ACATTCGTCG TCAAGCCGTC GGAGTTTGCC
AGCGCATCGA CACTCGCATT TGCGGAACTC TTCGAGAAGG CCGGATTCCC CCCGGGTGTG
ATCAACGTAG TGTGTGGAAC CGGGCAGGCC GTTGGTGCGC CGCTTGTCAC GCATCCGGAC
GTGGCAAAAA TCGCGTTCAC TGGATCCGAT GCGGCTGGCA AGGCGATCAA TCGGGCCGCC
GCGGAAGATC TGAAGCACGT CACCCTGGAA CTCGGTGGGA AGTCGCCGAA CATCGTATTT
GAGGATGCGG ACCTCGATGC CGCGGCGGCG GGTGTGGCGT CCGGCATTTT TGCCGCGGCC
GGTCAGACTT GCATTGCCGG TTCGCGGTTA CTGCTGCAGC GTTCGATTTA CGACGGGTTT
CTCGAGAAGA TCCGTCAAAT GGCGCAGGAC GTGAAGATCG GTGATCCGCT CGAGCCGGAC
ACTCAGTACG GACCTCTCGC CAACGTGCCT CACTACAACA AGGTTCTGAG TTGCATCGCG
GATGCGCGGA AGGAGGGGGC CGTGTTGGTG TGGGGCGGCA AGCCGTACGA TCATCCCAAC
GGCGGCCTCT TCGTGGAGCC GACCATCTTC CGGGACGTCG ATAACAACTC CCAGCTGGCA
CAGCGTGAGA TCTTTGGGCC GGTCCTTGCT GTTATTCGGT TTGAAGACGA GGAAGAGGCA
CTGGCATTGG CCAACCATTC GGATTTCGGC CTCGCGGCAG GTGTATGGAC GAAGGACATG
GCGCGCGTGT TCCGAATGAC GAAGGGATTG CAATCGGGCA CGGTGTGGGT CAATACGTAC
CGAGCGCTCA GTTACATGGC GCCGTTTGGC GGCGTGAAGG ACAGTGGCCT CGGGCGAGAA
AGTGGGCAGG AGATGATCAA AGCGTACATG CAAAACAAGA CGGTCTGGAT CAACAACGCT
ACCGGGAAAC CTGCCAATCC GTTCGTCATG CGGCTCGAGT AG
|
|---|
| Protein sequence | MQRFENFIDG RRVPSASGKW LPSLDPYRNE TWCEIPDSTA EDVDAAVKAA RAAFLSPSWA
GASATARGAM LRRLGDLITE NAQRLAEIEV RDNGKLLSEM LIQLRNLPQW YYYYGGLADK
IEGSVLPIEK KDHFVYTTWE PLGVVAAITA WNSPLLLLTW KLAPGLAAGN TFVVKPSEFA
SASTLAFAEL FEKAGFPPGV INVVCGTGQA VGAPLVTHPD VAKIAFTGSD AAGKAINRAA
AEDLKHVTLE LGGKSPNIVF EDADLDAAAA GVASGIFAAA GQTCIAGSRL LLQRSIYDGF
LEKIRQMAQD VKIGDPLEPD TQYGPLANVP HYNKVLSCIA DARKEGAVLV WGGKPYDHPN
GGLFVEPTIF RDVDNNSQLA QREIFGPVLA VIRFEDEEEA LALANHSDFG LAAGVWTKDM
ARVFRMTKGL QSGTVWVNTY RALSYMAPFG GVKDSGLGRE SGQEMIKAYM QNKTVWINNA
TGKPANPFVM RLE
|
|---|
| |