| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6406 |
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| Symbol | |
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| ID | 4315310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1030625 |
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| End bp | 1031854 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638154250 |
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| Product | major facilitator transporter |
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| Protein accession | YP_778284 |
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| Protein GI | 115361147 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.556381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGT TTTCTTCAAC GCCCGCCGCG CGCTATGCGG GTGCCGTCAG GCAGGCCGGC
GCACGCCAGG GCGCCGTGCT GCTGCTCGGC AGCAGCCTCA CCGTCATGGG CGCGGTGATG
ATCGCACCGA TCCTGCCCAA ACTCGCAGCC GAATTCGTGC CGGCCGATCC GCGGCTGGCC
GGGCTCGTGC CGCTCGTTGC GACCGGCCCG GCGCTCGCGA TCGCGCTGTG CGCGCCGCTC
GCCGGCTGGC TTGCCGATCG CGTCGGACGC AAGATGCTGC TGTTGCTCGC CACGCTCCTG
TACGGCCTGG TCGGCGCCGC GCCAGCATGG CTCAACGACC TCGGCGCGAT CCTCGCCTGC
CGGTTCGCGC TCGGCGCCGC GGAAGCGTGC GTGATGACGT GCTGCACGAC GCTGATCGGC
GACTACTGGC GTGGCGAACA ACGCGTACGC TACGTGAACC GGCAGGTCGT CACGATCGGC
CTTGTCGGCA CGGTGTTCTT CGTGCTCGGC GGCGCCGCCG GCGAGCACGC GTGGCGCTAT
CCGTTCTATC TCTATCTGCT GCCGATCCTG CTCGTGCCGG CGATCGCGAC CGTACTGTGG
GAACCGCTGC GCGACGGCGA ACCCGCCGAA CCGGGCGATG GCGTCACGAC GCTGTCCGGT
GCCCGGCTCG CATCGACGCT CGCCACCGGC TACGTGCTGA TCTGCGTCGG AATGGTCAGC
TCGTTCGTGG TTCCGGTGCA GATGCCGCAG CTGATAATCG ACATCGGCCA GCGCTCGTCG
ACGGTGATCG GCGCGGTAGC CGGCGTCGGT CTGCTGTCGA CGCTGGCCGG CTCGATCGCA
TGGCCATGGT TGCGGGGTGC GCTCGGCCGC CGCTTCGTCA ACGTCGTGCT GCTTGCGCTG
CTTGCGACGG GCCTCGCCTT GCTGGCCCGC GCCCATACGG TACCGGCCAT CGTCGCGGCG
GTCGTGATTC ACGGCTTCGG CGGCGGGATG CTGGTTCCCA ATGCAGTCCT GCCGCTGATG
CGCAAGCTGT CGCTCGCGAT GCGCGGGCGT GGCCTCGGTG GGTTCACTGC CGCGCTCTAT
CTCGGGCAGT TCGTCAGCCC GCTGGTCGTG TTCGGTTGCG CACAGGCGTT CGGCGGCCTA
CGCCCCGCCG TGTTCGCGAT TGCGGCGGGC ACGGCCGTCA TCGCGTTGCT CTGGTTGTTG
CCGGCAGCTC GCTGCCGCGG CGACGAATGA
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| Protein sequence | MNPFSSTPAA RYAGAVRQAG ARQGAVLLLG SSLTVMGAVM IAPILPKLAA EFVPADPRLA
GLVPLVATGP ALAIALCAPL AGWLADRVGR KMLLLLATLL YGLVGAAPAW LNDLGAILAC
RFALGAAEAC VMTCCTTLIG DYWRGEQRVR YVNRQVVTIG LVGTVFFVLG GAAGEHAWRY
PFYLYLLPIL LVPAIATVLW EPLRDGEPAE PGDGVTTLSG ARLASTLATG YVLICVGMVS
SFVVPVQMPQ LIIDIGQRSS TVIGAVAGVG LLSTLAGSIA WPWLRGALGR RFVNVVLLAL
LATGLALLAR AHTVPAIVAA VVIHGFGGGM LVPNAVLPLM RKLSLAMRGR GLGGFTAALY
LGQFVSPLVV FGCAQAFGGL RPAVFAIAAG TAVIALLWLL PAARCRGDE
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