| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6404 |
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| Symbol | |
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| ID | 4315308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1028305 |
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| End bp | 1029084 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638154248 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_778282 |
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| Protein GI | 115361145 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.327689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA ACCTGGAATT GCAAGGCAAG CGCGTCCTGG TGACGGCAGG CACCAAGGGG
ATCGGAAAGG CCGTCGTCGG CCTGTTCCAC GAACTCGGCG CGAAAGTACT CACCGCGGCC
AGAGGACAGC CGACCGATAC GTTGGCTGAC GTCTTCGTCG CAGCAGACTT GACGACAGTC
GACGGCTGCG ATGCGGTGGC AAGGGCCGTC ACGGGCCACT TTGGAGGCGT GGACATCATC
GTCCACGTCG CGGGTGGTTC GATGGCACCT GGTGGAGGGT TCGCCGCATT GGGTGAAGAC
GAGTGGGGGC AAGAATTGAA CCTCAATCTG CTTCCTGCCG TCCGGCTGGA TCGTGCATTG
TTGCCCGGCA TGTTGGCACA GGGTGCCGGC GTCGTCATTC ACGTCACCTC GATCCAACGC
GAACTTCCGT TACCGGAATC GACCACCGCC TATGCGGCGG CAAAGGCCGC GCTCTCGACA
TACAGCAAGA GCTTGTCGAA AGAGGTTTCA CCGAAGGGCA TTCGTGTCGT TAGGGTGGCG
CCCGGGTGGG TTGAAACCGA GGCATCCGTG GCGCTGGCCG AGCGGCTTGC CTTGCAGGCG
GGCACCGACT ACGAGGGTGG GAAAACGATC ATCATGAATT CACTGGGCGG CATTCCGCTG
GGGCGGCCGT CGCAACCCAT CGAGGTGGCG AACCTCATTG CATTCCTGGC TTCTCCGCGC
GCAGCCACGA TCACCGGAAC GGAGTATGTG ATAGACGGGG GCACGATTCC TACTGCGTAG
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| Protein sequence | MAMNLELQGK RVLVTAGTKG IGKAVVGLFH ELGAKVLTAA RGQPTDTLAD VFVAADLTTV
DGCDAVARAV TGHFGGVDII VHVAGGSMAP GGGFAALGED EWGQELNLNL LPAVRLDRAL
LPGMLAQGAG VVIHVTSIQR ELPLPESTTA YAAAKAALST YSKSLSKEVS PKGIRVVRVA
PGWVETEASV ALAERLALQA GTDYEGGKTI IMNSLGGIPL GRPSQPIEVA NLIAFLASPR
AATITGTEYV IDGGTIPTA
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