Gene Bamb_6390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6390 
Symbol 
ID4315294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1019932 
End bp1020495 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content63% 
IMG OID638154234 
Productheat shock protein Hsp20 
Protein accessionYP_778268 
Protein GI115361131 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.065602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG ATCCGAAAAA GTGGAACCCC TTCAAGTTTC TTCGCGGCGC TGCCCGCAAG 
TCCGATGCGG AAGGCGCGGA AAACGCGTCG GCCAGCGAGC AATGGCGCGC GTCGTGGCCT
GACATTTCGC GCCTGTTCTC GCGCGAATCA TGGGGTGCGA TGGAGGACTT CTTTCATGAC
CCGTTTGCCG GCCGCGGCGC GCTCGAGCGC TGGTTCGGCG ACTTCAGTTC ATCGCGCTTC
CAGCCGCGCA TCGACGTCGT CGACGAAGGG CCGGTGCTGC GCGTGACCGC CGAACTGCCC
GGCATGGAGC GCGACGATCT GAAGGTGAGC GTCGAGGATG GGGCAATCGT GCTGCGCGGC
GAGAAAAGGC AGGACGTGCA CAGTGAGGAA AACGGCTGCT ACCGGCTGGA GCGCGCGCAT
GGAAGCTTCA CGCGCACGAT CCCGATGCCG GAAAACGCCG ATCCCGAGCA CACGTTGGCA
AAGTTCGACA ACGGCGTCCT CACGCTGACC GTGCCGAAAT CGGAACCGGC CAAATTCACG
AGCCGCACGA TCGATATCGG CTGA
 
Protein sequence
MNTDPKKWNP FKFLRGAARK SDAEGAENAS ASEQWRASWP DISRLFSRES WGAMEDFFHD 
PFAGRGALER WFGDFSSSRF QPRIDVVDEG PVLRVTAELP GMERDDLKVS VEDGAIVLRG
EKRQDVHSEE NGCYRLERAH GSFTRTIPMP ENADPEHTLA KFDNGVLTLT VPKSEPAKFT
SRTIDIG