Gene Bamb_6374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6374 
Symbol 
ID4315278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1004887 
End bp1006128 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content71% 
IMG OID638154218 
Productcitrate synthase 
Protein accessionYP_778252 
Protein GI115361115 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.154136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACT GGATCACCCT GACGGAAGCC GCGCGGCGGC TCGGCGTGCG GGCGCAGACC 
GTCTACGCGT ATGCGAGCCG CGGCAGCATC GCCGTGATGC AGGATCCCGA CGATCCGCGC
AAGAGCCTGT ATCGCGCCGA GGACGTGATC GCGCTGTGTC GCAAGAAACA GGTCGGCCGC
AAGCGCGCGG CGCTGGCGGC TGGCACGATC TTCGGCGCCG AGCCATGCAT CCCGAGCGGC
ATCACCACCT TCGCCAAGGG CCGTGCGTGG TATCGCGGCC GCGACAGCAT TCAACTGTCG
GACACCGCCA CGCTCGAGGA CACGGCCGCG CTGCTCTGGC AAGCCACCAC GCCCGTGACG
TTCGACGCGC CCGCGGTTGC CTTGCCGGCC GGCGAGCGTG ATCGCCAGTG CGCGTTCACG
CTGCTTGCCA CGTTGGCGGC GCATGGCCAC TCGACGCTGG GCCGGCTCGA CAGCGCGCTG
CACGCCGAGG CCGGCCAACT CGTCGCGATC GTCGCGCGCG CGTTCGGCGC ACACGACGAT
GGGGCCCTGC CGTGGACCCA TCAGCGGCTC GCGGCGGGCT GGGGCCTGGA CGATCGCGGC
GCGGACCTGC TGCGTCGCGC GATGGTGCTC GTCGCCGATC ACGAGATCAC GAGTTCGGCG
TTCGCCGCGC GCATCACCGC GTCGACCGGC GCGTCGCTCG CGGGCTGCCT GCTGACCGGG
CTCGCGACGT TGTCGGGCCC GCTGCACGGC GACGCGTCGG GACGCGTGCG CGCGGTGTTC
GACGACGTGC AACGGCTCGG CGCCGCGCAC GTGGTCGATC ATCACCTGAA GTCCGCGATC
CCGATCCCCG GCTTCGGTCA TCATCTGTAC CCCGACGGCG ACCCGCGCGC GGCCGCGTTG
CTCGCGCGGC TCGATCCGCC GGCGGAACTC GCGCGCTTCA TCGACAAAGT GACGACGCTC
ACCGGCCAGC GGCCGACCAT CGATGTCGCG CTTGCGATGC TGTCGGTGCA GCTTCGGTTG
CCGCGCGACG CGGCGTTCGG GCTGTTCGCG ATCGCGCGCA GCGTCGGGCT GCTGGCCCAC
TGCATCGAAC AGCTGCGCGT GGGCAAGGTG ATCCGGCCGC GCAGCCGCTA TACGGGGCCG
ACGCTCGATG AACGGCATCT GCGCCCCGAG GCAGAGGACG ACGGCAAACT GCCGAAAGCC
GGCGTGATCG AGAAGAACCG GGTGTTCAAG ATCGTGGATT GA
 
Protein sequence
MHNWITLTEA ARRLGVRAQT VYAYASRGSI AVMQDPDDPR KSLYRAEDVI ALCRKKQVGR 
KRAALAAGTI FGAEPCIPSG ITTFAKGRAW YRGRDSIQLS DTATLEDTAA LLWQATTPVT
FDAPAVALPA GERDRQCAFT LLATLAAHGH STLGRLDSAL HAEAGQLVAI VARAFGAHDD
GALPWTHQRL AAGWGLDDRG ADLLRRAMVL VADHEITSSA FAARITASTG ASLAGCLLTG
LATLSGPLHG DASGRVRAVF DDVQRLGAAH VVDHHLKSAI PIPGFGHHLY PDGDPRAAAL
LARLDPPAEL ARFIDKVTTL TGQRPTIDVA LAMLSVQLRL PRDAAFGLFA IARSVGLLAH
CIEQLRVGKV IRPRSRYTGP TLDERHLRPE AEDDGKLPKA GVIEKNRVFK IVD