| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6319 |
|---|
| Symbol | |
|---|
| ID | 4315223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 918825 |
|---|
| End bp | 919946 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638154163 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_778197 |
|---|
| Protein GI | 115361060 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.834758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGC TGCGCCATCG GCTGCACGCG CATCCTGAGC TCGGTTTCGA AGAAGAGGCC
ACGAGCGCGC TCGTTGCCGA CTGCCTGACA ACATGGGGTT ATCGGGTCAC GCGCGGCCTC
GGCGGCACCG GCGTGGTCGG CACGCTCACG CGCGGCGCCG GCAAGCGGCT CGGGCTGCGC
GCGGACATGG ACGCGCTGCC GATCCGCGAG ACGACCGGGC TCCCGCATGC GAGCCGCCGC
GACGGCGTGA TGCACGCGTG CGGCCACGAC GGCCACACGG CGATGCTGCT CGCGGCGGCC
CGGTGTCTGG CCCAGCGCGA GCGCTTCAGC GGCACGCTGA ACCTGATTTT CCAGCCGGCG
GAGGAAGGGC TCGGTGGCGC GAAGCGGATG CTCGACGACG GGCTGTTCAC GCAGTTCCCG
TGCGATGCCG TATTCGCAAT GCATAACGTG CCGGGGCTGC CGGCCGGCGT GCTCGGCTTC
TGCGACGGCC CGGCGATGGC GTCGGCCGAC GAAGTGCGCG TGCGGGTGAT CGGGCGCGGC
GGCCATGGCG CGGCGCCGCA CACGACGATC GATCCGGTGG TTGTCTGTGC ATCGATCGTG
ATGGCGCTGC AGACGGTCGT GTCGCGCAAC GTGAATCCGC AGGAGCTGGC CATCGTGTCG
ACGGGCTCGA TCCACGCGGG CACTGCATCG AACGTGATTC CGCCGCATGC GGATCTCGAA
CTGAGCGTGC GTGCGCTGTC GCCGGACGTG CGCGCGCTGC TGGAGCGGCG CATTCGCGCG
ATCGTGCAAG GTCAGGCCGA CAGCTATGGC GCGACGGCCG AGATCGACTA TCGCCACGGT
TATCCGGTGC TCGTCAATCA CGCGGCGGAA ACGGCGTTCG CCCGTGACGT GGCGCGCGAA
TGGGGCGGCG ACGACGCGCT GATTCCGCAT CTGCGGCCGA TCGCGGCGAG CGAGGATTTC
GCATTCATGC TCGACGCGTG CCCGGGCAGC TACCTGTCGA TCGGCAACGG CGACGGCGCG
GCTGGCTGCG GGCTGCACAA TCCGGGCTAC GACTTCAACG ACGCGTGCCT CGCGACCGGC
GCGAGCTACT GGATCGCGCT CGCCGAGCGT TATCTCGCGT GA
|
|---|
| Protein sequence | MIALRHRLHA HPELGFEEEA TSALVADCLT TWGYRVTRGL GGTGVVGTLT RGAGKRLGLR
ADMDALPIRE TTGLPHASRR DGVMHACGHD GHTAMLLAAA RCLAQRERFS GTLNLIFQPA
EEGLGGAKRM LDDGLFTQFP CDAVFAMHNV PGLPAGVLGF CDGPAMASAD EVRVRVIGRG
GHGAAPHTTI DPVVVCASIV MALQTVVSRN VNPQELAIVS TGSIHAGTAS NVIPPHADLE
LSVRALSPDV RALLERRIRA IVQGQADSYG ATAEIDYRHG YPVLVNHAAE TAFARDVARE
WGGDDALIPH LRPIAASEDF AFMLDACPGS YLSIGNGDGA AGCGLHNPGY DFNDACLATG
ASYWIALAER YLA
|
|---|
| |