| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6279 |
|---|
| Symbol | |
|---|
| ID | 4315183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 873273 |
|---|
| End bp | 874181 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638154123 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_778157 |
|---|
| Protein GI | 115361020 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACA TCGACCTCAA GACCCTGCGG CTGTTCGTGG CGGTGTGCGA TCACGGCAAT
ATCGCGCGTG CCGCGCAAGA AGCGCACATC GAGCCTTCGG CGATCAGCAA GCGCATCGCG
CAGCTCGAAA GCGATCTCGG CGTGCCGGCG CTCACGCGGT CACGACGCGG CGTCGCGCCC
ACGCCGGCCG GCATCGCGCT GCTCGAGCAT GCGCGCAGCA TGTTGTTCAC GATGGAGCGG
ATCGCAGCCG ACGTCACCGC GATCGGCGAC GGGCTGCAGG GGCGCGTGAG CATCTGCGCG
TCGGCATCGG CGATCGCGGA AGCCTTGCTG GACGACATCG CGTCGTTCAT GCGCGATCCG
GCCAACCGGA ACATCAAGGT CGACGTGGAA GAGCGGCTGT CGCGCGATCT TGTCCGGCAG
GTGCGCGAAG GGGCTGCCGC GCTCGGCGTG TGCTGGGACA ACGTCGACCT GCAAGGGCTG
CAGGAGCGGT CCTATCGCCA CGACCAGTTG GCGCTCGCCG TGCATCCCGA GCATCCGCTC
GCCGGCCGTC GGTCGATCGG CTTCGACGAC ACGCTCGAAT TCGAGCACGT CGGCTTGCCG
CCGGCCACCG CTGTTCATAC GATGCTCAAG CGGGCCGCCG CGGACCGCGG CCGGACCGTG
TCGTATCGCG TGATCGTGTC GAGCTTCGAC GCGGCGTTTC GCGTCGTGGC CGCGGGCCTG
GGCATCAGCG TCATTCCGGT CGAAGTGGCG GCGGCTTACC GGCAGTCGCT CGGCGTGCAC
ATGATCCCGC TCACCGACTC ATGGGCGAAG CGCCGCTTCA TCGTGTGTTT CCAGCGCTTC
GATACGCTGC AGCCCGCCGC CCAGCGGATG GTCGACCATC TCGCGAACCG CGCCGTCGGC
GGCCGTTGA
|
|---|
| Protein sequence | MRDIDLKTLR LFVAVCDHGN IARAAQEAHI EPSAISKRIA QLESDLGVPA LTRSRRGVAP
TPAGIALLEH ARSMLFTMER IAADVTAIGD GLQGRVSICA SASAIAEALL DDIASFMRDP
ANRNIKVDVE ERLSRDLVRQ VREGAAALGV CWDNVDLQGL QERSYRHDQL ALAVHPEHPL
AGRRSIGFDD TLEFEHVGLP PATAVHTMLK RAAADRGRTV SYRVIVSSFD AAFRVVAAGL
GISVIPVEVA AAYRQSLGVH MIPLTDSWAK RRFIVCFQRF DTLQPAAQRM VDHLANRAVG
GR
|
|---|
| |