| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6267 |
|---|
| Symbol | |
|---|
| ID | 4315171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 859499 |
|---|
| End bp | 860470 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638154111 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_778145 |
|---|
| Protein GI | 115361008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.69254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCCGC CCATCGGAGT CGTCAGCCGG AGCACGTTGA TGAGCAAGCG TGACCGAAAC
CCAGCGAGCG CCGCGCTACG CAGGAAGGCG TGGATGTTGA TCGTTCTGGC GGCCTGTTGG
CTGCCGTGCG TGGGGTTGTG GGCTGGAACC TCCGACGACG CCACCCGTTT GCGCGCGCTC
TACCAGAATC TGAAACCGCA GCTCGATAAC AACGCGTTTC ATCGGCGAAT GTATCTGGAT
TCACAGGAGT CGTTCTCCAC GGTCACGGGC GAAGTGTACG CAGAAGTGGA CTACCCGTTC
GCGACCGTCA GCAACGTTCT GGATTACCAG TCGCAGGGCC TGGCCAACTG GTGCGAGCTG
TTGATCCTGC ATCCGAACAT CAAGTACTGC CGTGCGCCCG GCACGAATAG CGACAACATG
CTGGCCCTGA ATATCAGCAA ACGGGAAGCC GCCGCGGAGC TCCCGGCCAC CTACCGCCTG
TATTTCCGTT ACGACGCGGC GGCTCGGGCC CCGGGATACT TCAAGGTCAA ACTCCACGCC
GACAGCGGAC CGTTGAACAC CCGGGATTAT CAGATTGTCC TGGAAGCGGT GCAGCTCGGT
AGCAACCGCA CGTTCCTGCA TCTGACCTAT GCATTCAGCT ATGGCCTGGT CGGGCGCCTT
GCGATGAAAA GCTTTCTGGC AACGTTTGAC CGCGGCAAGA TCGGCTTCAC AAACGTCGCA
GGTCCGTCCG CGGCACAAGC GGAATACGTC GACGGCATAC GAGGCCTCGT GGAGCGCAAC
ACCATGCGCT ACTACCTCGC CATCGACGCC TATCTTGCCA CCCTATCGAG CCCGCCCGAC
AAGCAGCTCG AGCAACGCCT GAGCACGTGG TTCAATTCCA GCGAGCAATA TGCGCGGCAG
CTGCACGAAA TCGACCGACA GCAGTACTTG CGGATGAAAC AGGACGAATA CCGGCGCCAG
CAGACGGAGT AG
|
|---|
| Protein sequence | MGPPIGVVSR STLMSKRDRN PASAALRRKA WMLIVLAACW LPCVGLWAGT SDDATRLRAL
YQNLKPQLDN NAFHRRMYLD SQESFSTVTG EVYAEVDYPF ATVSNVLDYQ SQGLANWCEL
LILHPNIKYC RAPGTNSDNM LALNISKREA AAELPATYRL YFRYDAAARA PGYFKVKLHA
DSGPLNTRDY QIVLEAVQLG SNRTFLHLTY AFSYGLVGRL AMKSFLATFD RGKIGFTNVA
GPSAAQAEYV DGIRGLVERN TMRYYLAIDA YLATLSSPPD KQLEQRLSTW FNSSEQYARQ
LHEIDRQQYL RMKQDEYRRQ QTE
|
|---|
| |