Gene Bamb_6259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6259 
Symbol 
ID4315163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp850649 
End bp851131 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID638154103 
Producthypothetical protein 
Protein accessionYP_778137 
Protein GI115361000 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA TCCGTCTTTG TACCGCTGCT CTTGCAGCCT GCGTCTCCTT TTTCGCATTC 
ACGACGCCCG CCACGGCCGG TGGCGCGCCA CGTCCGCCCG AAGCGGCCAT CAAGGCCGAA
AACGCCCGAT GGGCGAATGC TTTTGCGCGC GGAGACTACG AGGCGATAGG CCGCCTCTAC
ACCGACGACG GCACACTCTT GCCGCCCGGA GGCGACAAAG TCACCGGGGG CCGCGCGATC
GCCGAGTACT TAACCAAGGG CTATGCTGGA ACGAAACCGG GCACCGTATC GTTCAGCCAT
TACGAGTTCT ACGGTGACGA CCGGATGGTG ACGGAGGTGT CGGATGCGGA CGTGCGCGAC
CACGATGGAA AGCTCCAGAT CCGCGGCAAG CAGATCCTCG TGTTTGTGAA GCAGGCCGGC
GAGTGGAAGC TGCATCGCGA CATGTGGAAC GACTACCCTC CGGTCAAAAC CGCCGACCAT
TGA
 
Protein sequence
MQQIRLCTAA LAACVSFFAF TTPATAGGAP RPPEAAIKAE NARWANAFAR GDYEAIGRLY 
TDDGTLLPPG GDKVTGGRAI AEYLTKGYAG TKPGTVSFSH YEFYGDDRMV TEVSDADVRD
HDGKLQIRGK QILVFVKQAG EWKLHRDMWN DYPPVKTADH