Gene Bamb_6234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6234 
Symbol 
ID4315138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp810131 
End bp811879 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content66% 
IMG OID638154078 
Producthypothetical protein 
Protein accessionYP_778112 
Protein GI115360975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATC AACCGACATA CGAGCAGGAC GCCAGATACA CCCGCGCCCT CGCAAGCTTG 
CTGACGCATC CGTCTTTCGA TGCCGTGCGC GACGAACCCG ATCGCTACAC GATGCAGTCA
CGCATTTACG AACAACTGCA TCTGCTCAAC CGGCACGCGG GCGGTGGCAC GGCGTTGCTG
GCGGATCGCC ATCGTCTTTT CGACACGCTG GCCTTCGCGG CCACCGTCAG CCCGCCGCTG
TTCAACGTCG CGCAGGCGCA CTACGGCGTA TGCCTCGCGA CGATCAAGAC GCTGGGCAAG
CCGTCCGTCG AACTGGACCG CATCATCGAC GAACTCGACA GTCTTTCGTC AGTCGCGGCG
ATCCTGATCA CCGAGGTCGG CGTGGCCTGC AGCCATCTGT CGGTCGCGAC GCGCGCCGAA
TACGATCCGG CGACCGACAG CTTCGTGCTG GTCACGCCCA ACGAGCGCGC GTGCAAGATG
ATGGCGAACG TTGCATTGGA CGGCGTCGCG AAAACCGGCG TGGTATTTGC GCAGCTCTGG
TGCGGCGGCG AGAATCGCGG CCTGTTTCCG TTCGTGGTGC CGATTCGCGA CCGCGTGCGC
GTGTTCGACG GCATACACGT CAAGGCGCTC GCCGGCGTGT CGTCGATGGG GCTGGACTAC
AGCCTCGTAT CGTTCGCGCG CGTACGCGTG CCGCGCACGC ACTGGCTTCA GGACACGGCC
ACCATCGACG CGAACGGGCA GTTCCACGAT CCGTTGGGCG CCGACCAGCG CCTCGTCCGC
TCGCTGGGCG TCAGTGCGAA CGCCACGACC GCGACTGCCG TTGGCGTGTC GGCCGCGGCA
CGGGCGTGCA TCTGGACCAA CCTGCGATAC GCGCAGCGGC GAACGACCGG TGCGCGGCTT
GGCGGCAACC GGCGCATGCT GGAATTTCGC AATCAGCAGA GCCTGCTGTT CGGCGCGTTG
GCCGAAGCGT TCGTGATCAG CCATTTCGCA CGCCGGCTGG TGGCGAGTGA CGGCAGTGAA
GCCATGTCGT CCGATATCGC GGCCGTGCCT TGGGCCGCCG TTCACCGAAT GGGGGCGTTG
ACGAAGGCGG TGACCGTCGC CGGCGCCGCC GACGTGATCC GCAATTGCCG CCGCGCCAGT
GGCGCGCACG GATGCCTCGG CGCGAATCGA TTCGGCAGCT ACGAGGACCT GACGGACGCT
TATTCGTCCG CCGGCGGCGA CAACCAGTTG ATCCTGCTCG AGATCGGCCG CGAACTCGCC
TCCTCGCCAT CCCGCCTTTC GGCGGACATC GGCACGCCGG AGCGGATCGA CGATGCGGCG
GCACTCCGCC AGCTGGCCCG CTTCGAAGAG CACCGCCAGC ACGCTCGGGC GACGCACGGT
CTCGCACTCG ATGCATCCGA TCCAGAGGCT GCGTTCGCCG CATGGAACCC GCGCCTTCCC
GCGCTGCTCG ACCTGGCCAG AGCGCATGGC CGCCGGATCG CACTCGAGGG ATTCCTGCAG
GACGTGCATG CCGCCGACGA TGCCGACTCG GCGCTGGCCC TCGCGACGAT TTATGCGCTC
GAGCATTTCG GCGGGTCGCT GGACTACGTC GAACGCGATC GCGCATTGTC GGGGGCATTC
GACATCGTTC TCGGCGATCT GGATCGGCTG CTCGACGCAT TCGGGTTGTC GACCGAGTTG
ATCAGAGCAC CGATGGCGCA GGACGACTAC GTGCACGCCT ACATCGGCGG CGAGTGGCCG
GATCTCTGA
 
Protein sequence
MLDQPTYEQD ARYTRALASL LTHPSFDAVR DEPDRYTMQS RIYEQLHLLN RHAGGGTALL 
ADRHRLFDTL AFAATVSPPL FNVAQAHYGV CLATIKTLGK PSVELDRIID ELDSLSSVAA
ILITEVGVAC SHLSVATRAE YDPATDSFVL VTPNERACKM MANVALDGVA KTGVVFAQLW
CGGENRGLFP FVVPIRDRVR VFDGIHVKAL AGVSSMGLDY SLVSFARVRV PRTHWLQDTA
TIDANGQFHD PLGADQRLVR SLGVSANATT ATAVGVSAAA RACIWTNLRY AQRRTTGARL
GGNRRMLEFR NQQSLLFGAL AEAFVISHFA RRLVASDGSE AMSSDIAAVP WAAVHRMGAL
TKAVTVAGAA DVIRNCRRAS GAHGCLGANR FGSYEDLTDA YSSAGGDNQL ILLEIGRELA
SSPSRLSADI GTPERIDDAA ALRQLARFEE HRQHARATHG LALDASDPEA AFAAWNPRLP
ALLDLARAHG RRIALEGFLQ DVHAADDADS ALALATIYAL EHFGGSLDYV ERDRALSGAF
DIVLGDLDRL LDAFGLSTEL IRAPMAQDDY VHAYIGGEWP DL