Gene Bamb_6209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6209 
Symbol 
ID4315113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp779319 
End bp780467 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID638154053 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_778087 
Protein GI115360950 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTG CGATTGCTCT GGTCCTGATC ATCGCAGTGG CGGTGGGGTT TCACTTTGCC 
AGCCCGTGGT GGATCACGCC GATCGCGTCG AACTGGGTGC GCATGGACGA CATGCTGACG
ATCACGCTCG TCATCACCGG CGCGTTCTTC ATCGCGATCA ACCTGTTCAT CGTGCTCGCA
CTGCTGCGCT ACCGCCATCG CAGCGGCCGT CGCGCGGCCT ACGAGCCGCA CAACAGGCGG
CTCGAATGGT GGCTGATCGG CCTGACCTCG GTCGGCGTGG CCGCATTGCT GGCACCGGGG
CTCTTCGTTT ATGCGGACTA CGTACGACCG CCGTCCAAGG TGCTGCAGAT GGAAGTGCTC
GGCCAGCAAT GGCAATGGCG CTTCCGCTTC GCCGGACCCG CCGGCAAGCT GGGCACGACG
GACGTGCGCT ACATCAGCGA CGCCAACCCG TTCGGCCTGA ACCCCGGCGA CCCCAACGGC
CGCGACAACT ATCTGATCGA TTCATCCGAA GTGCACTTGC CGCTCAACCG GCCGGTGCAG
GTGCTGGCAC GGTCGCGCGA CGTGCTGCAC GACTTCTACG TGCCGCCGTT CCGCGCGCGG
ATGAACATGG TGCCCGGCAT GGTGACCACC TTCTGGTTCA CGCCGACCAA GGCCGGGCGT
TACGACATCC TGTGCGCGCA GCTCTGCGGC ATCGGGCATT CGAACATGCG CGGCGTGGTG
GTGGTGGAAG ACGAAGCGTC ATTCTCGCGC TGGCTTGCGC GCCAGCCGAC GTTCGCGCAG
CGGCAGCAGG CGAACGTGCA GGCCGCGCCG GCCGCCGCGG GCGGCAGCGC CCAGGCGCTG
GCCGACCAGG GCAAGGCGCT CGCGGCGGCC AAGGGCTGCA TCGCGTGCCA TACCGTGGAC
GGCACGCCGC GCGTGGGCCC CACGTGGAAG GGCCTGTACG GCAAGACCGA AACGATGGCC
GACGGCAGCA CCGCGAAGGT GGACGACGCG TATCTGCGCG CGTTCATCAC CAACCCGACG
GCACGCGTCG TGAAGGGCTT CTCGCCGATC ATGCCGCACT TCGACCTGAG CGATCAGGAA
CTGGCCGCAC TGGTGGCCTA TATCAAAGCG CAAGGCGGGC CGGACGCCAG CAGCGCGGCG
CAGCGCTAG
 
Protein sequence
MALAIALVLI IAVAVGFHFA SPWWITPIAS NWVRMDDMLT ITLVITGAFF IAINLFIVLA 
LLRYRHRSGR RAAYEPHNRR LEWWLIGLTS VGVAALLAPG LFVYADYVRP PSKVLQMEVL
GQQWQWRFRF AGPAGKLGTT DVRYISDANP FGLNPGDPNG RDNYLIDSSE VHLPLNRPVQ
VLARSRDVLH DFYVPPFRAR MNMVPGMVTT FWFTPTKAGR YDILCAQLCG IGHSNMRGVV
VVEDEASFSR WLARQPTFAQ RQQANVQAAP AAAGGSAQAL ADQGKALAAA KGCIACHTVD
GTPRVGPTWK GLYGKTETMA DGSTAKVDDA YLRAFITNPT ARVVKGFSPI MPHFDLSDQE
LAALVAYIKA QGGPDASSAA QR