| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6201 |
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| Symbol | |
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| ID | 4315105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 770635 |
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| End bp | 774696 |
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| Gene Length | 4062 bp |
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| Protein Length | 1353 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638154045 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_778079 |
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| Protein GI | 115360942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.984796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CGTTCAAGTC GATCTGGAAC GAAGCACTGG GGGCGTGGGT TGCGGCGTCC
GAGCTCGATC GCGCGCGCGG CAAGCGCGTG GCGTCGTCGA GGAGCGCGGG CGAGCACGCT
GCCCACGAAG GCGCCGCCGC GAGCATGGCA ACGCCGCCTG GGCTGTCGCC CCGGCGACTG
GTCATGATGA TGGCCGCCGC GTACCTCGGA CTGTTTCAGA CGGGCGCCCA CGCGCAGTAT
TCGGCCGGTG GCGGCTCCGC GACGGGCGGT GCCAGTTCGA TCGCGGTCGG CAACGGTTCG
CTTGCGACGC AGACGAATTC GACCGCGTTC GGCAATCTGT CGACGGCGGC GGGGGTGTCG
TCTACGGCGA TCGGCCCGGG TGCGCATGCG ATGGCGGATG GCGGGACGGC CGTCGGTATC
AACTCGCAGG CGACCGGCGT CAACAGTGTG GCGATGGGCG TGCAGGCGAT CGGTTCAGGC
GCTTTCGCGG TCGCGGTCGG CAACCTGTCG ACCGCGACGC AAACCGGTTC GGTGGCGCTC
GGTAGCGGTG CGGCGGCGAC CGGCGTGTCC GCGATCGGGC TCGGCAACAA TGCGTTCGCG
TCGGGCCAGT ACGCGGCGGC ACTCGGGCTC GGGGCGAGCG CGGCAGGGGC GCAAAGCATC
GCGCTCGGCT ATGCGTCGCA TGCCGACCTG ACGGGCTCGG TCGCCCTCGG CAACCAGTCG
ACGGGTTCGG GGGCGGCCGC CGTTGCCGTG GGCAGCGGCG CGCTGGCTTC AGGCAATTCG
GGCGTGGCAA TGGGGGTGAA CAGTGGCGCG AAGGGCACGT CGTCGATCGC CATCGGCTGG
GGCGGCACCG CAGGCGTACC CGGCTCGGGC ACGCAGTCGC TCGGCACCAG TTCGATCGCG
CTGGGATCGA ATACGACGGC CGGCGCCAAC AACGCGGCCG CATTCGGCCT GAACGCGAAT
GCATCGGGCC TCAGTTCGAT CGCGATGGGC GTGCAGTCGA CCGCGACGCA GCAGTATGGC
GTTGCGCTCG GCAACCTCGC GCTCGCGACC GGTATCTCGG CAAGTGCGCT GGGGCCGGGC
GCGACGGCGT CGGCATTGAA TTCGACGGCG GTCGGCATCA ACAGCGTGGC GGCGGCGACC
TCGACCGTCG CGATCGGCGA CAGCAACTCG GTCGCCGCGG GCGCAGGCGC CGGCTCGATC
GCCGGCGGCA ACTTGTCGAA GGTCCTGGGC GGCACCGGCG CCGTCGCGCT CGGCTTTGGC
CAGACCGTCA GCGGCAACGG CGCGGTCGCG ATCGGCGACC CGAGCACCGC GATCGGCACC
GGCGCGGTCA CGGCCGGTTC GAACAACACC GCGAACGGCG ACGGCGCCGT GGCGATCGGC
AACTCGAACA TTGCGCAAGG CATCGGCTCC GTCGCGCTCG GCAATACGTC GACGGCGGCA
GCGGCGGGCG CCGTGGCGTT CGGCGCGTCG GCCGTCGCGA ACAATGCAAA CGACGTCGCG
CTCGGCTCCG GTTCGGTGAC CGCCGCGCCG CATCCGACCG CCACGGGCAC CATCGGCGGC
GTCACGTATA CGTTCAACGG CGTCAATCCG GTGAGCGTCG TCAGCGTCGG CGGAGTGGGA
ACCGAGCGCC AGATCACCAA CGTCGCGGCC GGGCGGATCA GCCCGACGAG TACCGATGCG
ATCAACGGCT CGCAGCTCGA TGCGACGAAC CAGGCGGTGA CTTCGCTGTC GACGTCGACG
TTGTCGAGCA TCACGTCGTT GTCGACTTCG ACGTCGACCG GGATCGGTTC GTTGTCCACG
GGCCTGAGCT CGACCAACAG TTCGGTGACG TCGCTGTCCA CGGGCCTGAG CTCGACCAAC
AGCGCGGTGA CGTCGCTGTC GACTTCGACG TCCACGGGCA TCAGCTCGTT GTCGACCGGC
TTGAGTTCGA CGAACAGCGC GGTGACGTCG CTGTCCACTT CGACGTCGAC CGGCATCGGT
TCGCTGTCCA CCGGCTTGAG CTCGACCAAC AGCGCGATCA CGTCGTTGTC GACGTCGACC
TCGACGGGCC TCAGCTCGTT GTCCACCGGC CTGAGTTCGA CCAACAGCAC GGTCACGTCG
CTGTCCACGT CGACCTCAAC GGGCCTCAGC TCGTTGTCCA CCGGCCTGAG TTCGACCAAC
AGCACGGTCA CGTCGCTGTC CACGTCGACC TCAACGGGCA TCGGCTCGCT GTCCACTGGC
CTGAGCGCGA CGAACAGCAA CCTCACGTCG CTGTCGACCG CCACGTCGAC GGGCATCGGT
TCGCTGTCGA CGAGCCTCAG CTCGATCGTG AACAACAACA CCAATCTCGG CAACAGCACG
GCAGGCGCGA TCGGCGGCGG CTCGACCTAC AACCCGACGA CCGGCACGAT TTCGGCGCCG
TCGTATGTGA CGTACAACAG CGACGGCTCG ACCTCGATCA ACAACAACGT CGGCTCCGTG
GTCGACAACA TCAACGCGCA CGGCATCAAG TATTTCCATG CGAACTCGAC CGCGCCGGAC
AGCCAGGCGC TGGGCGTCGA CAGCGTGGCG ATCGGGCCGA ACGCGATCTC GCGCGTGGAC
GGCAGCATCG CGCTCGGTGC GGGCTCGGTG GCCGATCGCG CGACGACGCC GTCGTCGGGC
ATCATCCGCA ACGGCACCGC GGCGATCCCG TTCAACACGA CGGACCAGAC GTTGCTCGGC
GCGGTGTCGG TGGGCGACAC GACGAACCGC ACGTATCGCC AGATCACCAA CGTCGCGGAC
GGCACGGGGC AGCAGGACGC GGTGACGGTA CGGCAGCTGA CCGGCGCGTT GCAGTCGTTC
GCGGTCACGG GCCAGAAGTA CTTCCACGCG AATTCGACGG CCGGCGACTC CCTCGCGGTC
GGCGCGGAAT CGGTCGCGGT CGGGCCGACG ACGGTCGTGA ACGGCGACAA CGGCGTGGGC
ATCGGCAACG GCGCGATCGT CGACCAGACC GCACCCGGCG GCGTCGCGAT CGGGCAGGCC
GCGAGTTCCG CGCAGGCCGA TGCGATCGCG CTCGGCAGCG GCGCGTCGGC CCTCGGCGCG
CAGTCGGTCG CACAGGGTGC CAATGCGTCG GCGGTCAGCG TGGGCAGCGT CGCGCTCGGC
TCGGGTGCGC ACAGCACCGC GACCGATGCG CTCGCGCTCG GCGCCGGTGC GTCGGCGACG
CTCGCGAACA GCGTCGCGCT GGGCGCCGGT TCGCTGACCA CGGTCGGCGC GCTGACGAAC
TACGTCGCGT ACGGCCTGAG CAGCCCGCAG TCGTCGGCCG GTGAAATCAA TATCGGCAAC
CGGCAGATCA CGGGCCTCGC CGCGGGCAAG AACGGCACGG ACGCGGTGAA CGTATCGCAG
CTCGACTCGG TCGCGAACCA GTTGACGACG CTGATCGATC AACGTACGAC CAATCTCGGC
GGGCAGTACA CGACGAACCC GCCGGGCGGC AACGTGCCGC CGGGGGCGAG CGGTTCGAAT
TCGTCGGCGG GCGGCTCGGG GGCGGTCGCG TCGGGTTCGA ACAGCACGGC GGTCGGCAAC
AGTTCGACGG CGTCCGGCAA CGGCTCGACC GCGATCGGCG TCGGCTCGAT CGCATCGGGC
AACAACTCGA CGGCGGTCGG CGCGGGCAGC AACGACGGCG GCCGCTCGAA CGTCGTCGCG
GTCGGCTCGG CGGATTCGCC GCGCCAGGTC GTCAACGTCG CGGCGGGTAC GCAGGGCACC
GATGCGGTGA ACGTGAACCA GTTGAATGCG GTGTCGAACC AGTTCACGCA GTCGCTGAAC
ACGGTCAACA ACCAGATCTC GCAGATGCAG CAGCAGATCC AGCAGACCGA TTCGATGGCG
CGTGAGGGGA TCGCCGCGAC GGCCGCGTTG GCGTCGATTC CGCACATGGA CCGCGACTCG
AACTTCGCGA TGGGCGTCGG TACGGCGTCG TTCCAGGGTC AGAAGGCCAT GGCCGTCGGT
GTGCAGGCGC GCCTCACGGA GAACCTGAAG GCGACGCTGA ACGGCGGCTT CGCCGGCAGC
CAGCGCGTCG TCGGCGCGGG CGTGCTGTAT CAGTGGAAGT AA
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| Protein sequence | MNKSFKSIWN EALGAWVAAS ELDRARGKRV ASSRSAGEHA AHEGAAASMA TPPGLSPRRL
VMMMAAAYLG LFQTGAHAQY SAGGGSATGG ASSIAVGNGS LATQTNSTAF GNLSTAAGVS
STAIGPGAHA MADGGTAVGI NSQATGVNSV AMGVQAIGSG AFAVAVGNLS TATQTGSVAL
GSGAAATGVS AIGLGNNAFA SGQYAAALGL GASAAGAQSI ALGYASHADL TGSVALGNQS
TGSGAAAVAV GSGALASGNS GVAMGVNSGA KGTSSIAIGW GGTAGVPGSG TQSLGTSSIA
LGSNTTAGAN NAAAFGLNAN ASGLSSIAMG VQSTATQQYG VALGNLALAT GISASALGPG
ATASALNSTA VGINSVAAAT STVAIGDSNS VAAGAGAGSI AGGNLSKVLG GTGAVALGFG
QTVSGNGAVA IGDPSTAIGT GAVTAGSNNT ANGDGAVAIG NSNIAQGIGS VALGNTSTAA
AAGAVAFGAS AVANNANDVA LGSGSVTAAP HPTATGTIGG VTYTFNGVNP VSVVSVGGVG
TERQITNVAA GRISPTSTDA INGSQLDATN QAVTSLSTST LSSITSLSTS TSTGIGSLST
GLSSTNSSVT SLSTGLSSTN SAVTSLSTST STGISSLSTG LSSTNSAVTS LSTSTSTGIG
SLSTGLSSTN SAITSLSTST STGLSSLSTG LSSTNSTVTS LSTSTSTGLS SLSTGLSSTN
STVTSLSTST STGIGSLSTG LSATNSNLTS LSTATSTGIG SLSTSLSSIV NNNTNLGNST
AGAIGGGSTY NPTTGTISAP SYVTYNSDGS TSINNNVGSV VDNINAHGIK YFHANSTAPD
SQALGVDSVA IGPNAISRVD GSIALGAGSV ADRATTPSSG IIRNGTAAIP FNTTDQTLLG
AVSVGDTTNR TYRQITNVAD GTGQQDAVTV RQLTGALQSF AVTGQKYFHA NSTAGDSLAV
GAESVAVGPT TVVNGDNGVG IGNGAIVDQT APGGVAIGQA ASSAQADAIA LGSGASALGA
QSVAQGANAS AVSVGSVALG SGAHSTATDA LALGAGASAT LANSVALGAG SLTTVGALTN
YVAYGLSSPQ SSAGEINIGN RQITGLAAGK NGTDAVNVSQ LDSVANQLTT LIDQRTTNLG
GQYTTNPPGG NVPPGASGSN SSAGGSGAVA SGSNSTAVGN SSTASGNGST AIGVGSIASG
NNSTAVGAGS NDGGRSNVVA VGSADSPRQV VNVAAGTQGT DAVNVNQLNA VSNQFTQSLN
TVNNQISQMQ QQIQQTDSMA REGIAATAAL ASIPHMDRDS NFAMGVGTAS FQGQKAMAVG
VQARLTENLK ATLNGGFAGS QRVVGAGVLY QWK
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