Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6165 |
Symbol | |
ID | 4315069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 733673 |
End bp | 734596 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638154009 |
Product | pyrroloquinoline quinone biosynthesis protein PqqB |
Protein accession | YP_778043 |
Protein GI | 115360906 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.494701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA AGATACTCGG CTCGGGCGCC GGCGGCGGAT TGCCGCAATG GAACTGCAAT TGCGGCAACT GCCGTCGCGC GCGTGCCGGC ACCGACGGCA TCGTGCCACG CACCCAATCG TCGATCGCGG TCAGCGGCGA CGGCGTCGAC TGGGTGCTGG TGAACGCGTC GCCGGACATC CTCGCGCAAC TGCGTGCCGA TCCCGACCTG CAGCCGGCCC GCGCGATCCG CGACAGTGCG ATCGTCGCCG TCGTGCTGTG CGACGCGCAG ATCGATCACG TGACGGGCTT GCTGATGCTG CGCGAGCGCA CGTCGCCGTT GCCGCTGTAC GCGAGCGCGC CCGTGCTCGA CGATTTGTCG ACGGGGCTGC CGCTCGTGCC GCTGCTCGGC CACTACTGCG GCGTCGACGT CCACCCGATC GCGCCGGGCG AACCGTTCGC GATTCCCGGC GCCGGCGGCA TCCGCTTCAC CGCCGTGCCG GTCGACAGCA AGCCGCCGCC TTATTCGCCG CGGCGTGCGG CGGCCGTTCC CGGCGATAAC ATCGCACTCC TGATCGAAGA TACGGCCACC GGCCGCCAGG CATTCTACGC ACCGGGGCTC GCCGACGTCG ACGACGACGT GCGCGCCGCG ATGCGCGACG CCGATCTCGT GCTGGTGGAC GGCACGTTCT GGACCGGCAC GGAAATGATC GACCTCGGCC TGTCGTCGAA GCACGCGGCC GAGATGGGCC ATCTCGCGCA GTGTGGCGAC GCGGCGCAGC CGGGGATGAT CGATCGGCTG CGGCCGTTGC CCGCGCATAC GCGCAAGGTG CTCACGCACA TCAACAACAC GAATCCGATT CTCGACCCCG GTTCCGCGCA GCGTGCGCAG TTGCGCGAGC ACGGGATCGA GGTCGCCCAC GACGGCATGC AAATCGAGAT CTGA
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Protein sequence | MKIKILGSGA GGGLPQWNCN CGNCRRARAG TDGIVPRTQS SIAVSGDGVD WVLVNASPDI LAQLRADPDL QPARAIRDSA IVAVVLCDAQ IDHVTGLLML RERTSPLPLY ASAPVLDDLS TGLPLVPLLG HYCGVDVHPI APGEPFAIPG AGGIRFTAVP VDSKPPPYSP RRAAAVPGDN IALLIEDTAT GRQAFYAPGL ADVDDDVRAA MRDADLVLVD GTFWTGTEMI DLGLSSKHAA EMGHLAQCGD AAQPGMIDRL RPLPAHTRKV LTHINNTNPI LDPGSAQRAQ LREHGIEVAH DGMQIEI
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