| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6065 |
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| Symbol | |
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| ID | 4314969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 625137 |
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| End bp | 626258 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638153909 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_777943 |
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| Protein GI | 115360806 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC GTTCCCGTCG TCGCGCGGCC CTGTGCGCCG CGCTCGTCAC GTCCGCGGGG
TTGGCCCTCG CGACCAGCCG GTCCGCCCAT GCGGGCGACG CCAACCTGAA CGTCTACAAC
TGGTCCCAGT ACATCGCGAA CGACACGGTG CCCAACTTCG AGAAGCAGAC GGGCATCAAG
GTGCGCTACG ACAGCTACGA CAGCGACGAC ACGTTGCAGA CCAAACTGCT CGCAGGCAGC
TCGGGCTACG ACATCGTCGT GCCGACGTCG AACTATCTCG CCCAGCAGAT CCAGGCCGGC
GTGTACCAGA AGCTCGACAA GTCGAAGCTG CCGAATCTCG CGAATCTCGA TCCGGTGCTG
ATGAAGATGA TCGCGAAGGC CGATCCGGGC AATCAGTACG GCGTGCCGTG GGCCTGGGGC
ACGACGGGCC TCGGCTACAA CGTTGACGCA GTGAAAAAGC GGCTCGGCGA GAGCGCGCCC
ACCGACAGCT GGGCACTGCT GTTCGATCCC GCGAACGCGG CGAAGCTCAA AGGCTGTGGC
ATCTCGCTGC TCGATGCGCC GGACGCCGCG TTCGCGGCCG CGCTGCAGTA CCTGGGCAAG
GATCCGGAGA GCAAGAATCC GGCCGACTAC CAGGCCGCCT ACGACGTGCT GAAGAAGATC
CGCCCGTACG TGACGCAGTT CAGCTCGGCC GGCTATGCGG ACGATCTCGC GAACAACGAC
GTGTGCGTCG TGCTCGGCTG GTCCGGCGAC GTCAGCGTCG CGCGGCGGCG CACGCTCGAC
GCGAAGCGTC CGTACGAAAT CCGCTACGTG AATCCGAAGG AAGGCGGCCT GCTGTGGTTC
GACGTGATGG CGATTCCGAA GGACGCACCG CACCCGGAAG CGGCGCTGAA GTGGATCAAC
TACATCGAGG AGCCGAAGAC CAACGCGGCG ATCACGAACG AGATCTTCTA TCCGAGCGCG
AACAAGGCCG CGAAATCGTT CGTGACGCCG GCGATCGCGC AGGATTCGGG CATCTACCTG
CCGGACGGCA CGCTCGCGAA GACGTCGCTC GCGATGCCGC GCAGCGCCGA CATCGCGCGG
ATGCAGAACC GGTTGTGGCT GCAACTGAAG TCGGGCGGTT GA
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| Protein sequence | MRIRSRRRAA LCAALVTSAG LALATSRSAH AGDANLNVYN WSQYIANDTV PNFEKQTGIK
VRYDSYDSDD TLQTKLLAGS SGYDIVVPTS NYLAQQIQAG VYQKLDKSKL PNLANLDPVL
MKMIAKADPG NQYGVPWAWG TTGLGYNVDA VKKRLGESAP TDSWALLFDP ANAAKLKGCG
ISLLDAPDAA FAAALQYLGK DPESKNPADY QAAYDVLKKI RPYVTQFSSA GYADDLANND
VCVVLGWSGD VSVARRRTLD AKRPYEIRYV NPKEGGLLWF DVMAIPKDAP HPEAALKWIN
YIEEPKTNAA ITNEIFYPSA NKAAKSFVTP AIAQDSGIYL PDGTLAKTSL AMPRSADIAR
MQNRLWLQLK SGG
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