Gene Bamb_6029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6029 
Symbol 
ID4314933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp584257 
End bp585945 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content61% 
IMG OID638153873 
Producttannase and feruloyl esterase 
Protein accessionYP_777907 
Protein GI115360770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.975133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC GGTTCAGCAC CCGCCGAAGC TCGGCTATTT TGAGTGCGCT ATTCGCAGCA 
TCAGCCGTTA CCGTATCGGG CTGCGGCGGC GACGACGCCG CACCGGCAAA CGCCACGGCC
GTGACGGCAG CCGCGAAGTG CAGTGCGTTG GCTGGCACGA CCGTTCCTGC CAGCTCGATC
GGGTTGCCGA CCACCGGTGC GACTGTCGTG TCCGCGACGC TCGTCGCCGA TACCGCTTCT
GGTAACCGCA ATGGTGAGTA CTGCAAAGTG CTTGGCACCA TTCACCCGGT CGATTTCAAT
GCACCCGATA TTCGGGCGGA AGTGGATCTT CCGACCAACT TCAACGGAAA AGCGGTCCAC
TTTGGCGGCG GCGGATTTGA CGGCACCATT GCCGATACCG AGGGTTCGCC CGCCGACGGA
TTCCTGGCGG GGGCAGAGCC CGCTGGTGTC AGTACGCCGT TGCGCAGGGG CTACGTAACG
ATGGGGAGCG ACAGCGGGCA TGAGGGAAAC GCGCTGGACG GTTCGTTTGC GGCGAACGAC
GAGGCACTTG CCAACTACGC AGGCGACCAC ATCAAGAAGA CGCATGATTT CGCAGCCTTC
CTCGCTAAGG CACGATATGG GTCGGACTTC GTGCATAGTT ATTTCATCGG CGGCTCGAGC
GGCGGACGAC AAGGCTTGAT CGCCGCGCAA CGCTTCCCGC ACGACTACGA CGGCATCATT
TCCACCTATC CCGCGTCGGG AATTACTGGG CTGTGGTTGC AGATGGGCAG GATCTCGCGA
TCTCTGCTGG CGCCCGGCGG ATACATCACG CCCGCCAAAG GCAAGGTCGT GCTCGCAGCG
GTCATCAAGC AATGCGACGC GCTGGACGGT GTGACCGACG GCATTATCAG CAACCCGGCT
GCGTGCGTGT TCGATCCGGC AGCGATTCGC TGCTCGGGCG GCGGCGACAC CGGCGACAGT
TGCTTGTCGG ACGCGCAAAT CAATACGCTG AACACCGCCG GCACACCGCT CGACTTCAGC
TTCGATCTGG CAAACGGAAT TCACACCTTT CCGGCATATA ACGCGTTCTC CGGTGCGGAC
TTTTGGTCGA CTCCGCTGGC CTGGGGTAGT TCCGCCGCCG ATGCGACGGT CGAGCCCGGG
GTCGTCGGCA AGACCGCATT CTTTTACGCG TTTCCCAATG ACATGCTCCG GTTCGCGGTC
GCTCGCGACG CTGCCGCCAG CATTCTGAAT TTCAATCCTG CGAACCCGGG CTCATTGACC
TCGCGCGTCC AGGCAGTCAG CGCGCTCATG GACAGCACCG GCACCGACTT GAGTCAATTT
CAGAGCCGTG GCGGCAAGAT CATTCTCCAG CACGGACAAT CCGATCAGTT CATCCCGGCG
CAATTGTCGA TCGATTACTA CAACAGGCTG GTATCCCGAT TCGGGCAGGG GCCGCTCAGT
CAATTTCTGA AGTTCTACCT GGTTCCGGGT GCAGCCCACA GCTTCGGCGG ACAATTCAAT
GGTTCATATG ACGGCCTGAC GGCATTGGAC AACTGGGTGA CGAAAGGAAT CGCGCCCAAA
GATCTCACCA TTACCGACCT GACTCCGGCA ACAGCCGGAC GTACCCGCCC GCTGTGCGAA
TACCCGCAGT GGCCGAAATA CATCGGGGGC GACCAGAATC TGGCGGCGAG CTTCTCGTGC
TCGAACTAG
 
Protein sequence
MRTRFSTRRS SAILSALFAA SAVTVSGCGG DDAAPANATA VTAAAKCSAL AGTTVPASSI 
GLPTTGATVV SATLVADTAS GNRNGEYCKV LGTIHPVDFN APDIRAEVDL PTNFNGKAVH
FGGGGFDGTI ADTEGSPADG FLAGAEPAGV STPLRRGYVT MGSDSGHEGN ALDGSFAAND
EALANYAGDH IKKTHDFAAF LAKARYGSDF VHSYFIGGSS GGRQGLIAAQ RFPHDYDGII
STYPASGITG LWLQMGRISR SLLAPGGYIT PAKGKVVLAA VIKQCDALDG VTDGIISNPA
ACVFDPAAIR CSGGGDTGDS CLSDAQINTL NTAGTPLDFS FDLANGIHTF PAYNAFSGAD
FWSTPLAWGS SAADATVEPG VVGKTAFFYA FPNDMLRFAV ARDAAASILN FNPANPGSLT
SRVQAVSALM DSTGTDLSQF QSRGGKIILQ HGQSDQFIPA QLSIDYYNRL VSRFGQGPLS
QFLKFYLVPG AAHSFGGQFN GSYDGLTALD NWVTKGIAPK DLTITDLTPA TAGRTRPLCE
YPQWPKYIGG DQNLAASFSC SN