Gene Bamb_6015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6015 
Symbol 
ID4314919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp566455 
End bp568596 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content71% 
IMG OID638153859 
Productfusaric acid resistance protein region 
Protein accessionYP_777893 
Protein GI115360756 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATC CGAGCCTTCG CGACTGGCTG TTCTCGGGTA AGACGTTCGC CGCGTCGATG 
CTGGCGCTGT ACCTCGGCCT GTATTTCCAG TTGCCGCGTC CGTACTGGGC GATGGCGAGC
GTCTACATCG TGTCGAACCC GTTCGTCGGC GCGACGCGCT CGAAGGCGCT GTATCGCGCG
CTCGGCACCG CGCTCGGCGC GGCCGCCGCG ATCCTGTTCG TGCCGCCGTT CGTCGAGACG
CCGCTCCTGT TCAGCGTCAT CGTCGCGACG TGGTGCGGCA CGCTGCTCTA CCTCGCGATC
TCCGACCGCA CCGCGCGCAG CTACGTGTTC ATGCTTGCCG GTTATACGAT GCCGCTGGTC
GCGCTGCCCA CCGTGACCGA TCCGTCGACG GTCTTCGACG TCGCGATCGC GCGCACCGAG
GAAATCGTGC TCGGCATCGT GTGCGCGAGC GTGGTCGGCA GCGCCGTGTT CCCGAACCGG
CTCGCGCCCA CGCTGATCGA GCGCACCGAC GCGTGGTTCA AGGACGCCGC GTTCTACGGC
CGCGAGACGC TGTCCGGGCA CCTCGCCGGC AAGGCGCTGT CCGCGTGCCG GCAGCGCCTC
GCGGCGACCA TCACCGGCCT CGAATTCCTG CTGAGCCAGC TGAGCTACGA CCACGCGCAC
CCGCACGTGC TCGCCCGCAC GCAGGCGCTC GCGGGCCGGA TGCAGTTGTT CCTGCCGCTG
ATGTCGTCGC TCGCCGATCC GCTGATCGCG CTGATGCGCG ACCTGCACGT GCGCCCTCCC
GCGCTCGACG CGCTGCTCGC CGACGCCGCG AAGTGGTTCG ACGCGCCGCT GCCGGCCTTG
AAGGACGGCA CCGACGGCGC GATGGCCGAC GACCCGGTCG CGGACGACTT GCGCGCGCGC
GTCGCGGCGC TGCAGCCGCC CGACAGCGCG CTGACGAGCT GGGACGGCGC GCTGCTGTCG
AACGCGCTGT GGCGGCTGCG CCAGGTCATC GACATCTGGC AGGACTGCCG CTCGCTGCGC
GCGCTGATCG CGAACGAGTC GGGCGTCTGG CAGCCGCGTT ACCGGCACTG GCGGCTCGGC
GGCACCGAGC GCTTCTTCGA TCGCGGGATG ATGCTGTTCT CGACGCTGAC CGTGGCCGGG
GCGATCGTGT TCGCGTGCTG GCTGTGGATC CAGTCCGGCT GGCACGACGG CGCCGGTGCC
GTCACGCTGG TCGCCGTCGC ATGCAGCTTC TTCGCGGCGC TCGACGAACC CGCGCCGCTC
GTATTCAAGT TCTTCCTGGC CACCACCGCG AGCGTCGTGT TCGCGGGCCT GTACCTGTTC
GCCGTGCTGC CGCACGTGCA CGACTTCGCG ATGCTAGTGC TGATGTTCGC CGGCCCGTTC
ATCCTGATCG GCACGCTGCT GCCGCGCCCG CAGTTCAACA TGGTGACGAT GCTCGTCGCG
GTGAACACCG CGACCTTCAT CAGCATCCAG AGCGCATACG AGGCCGATTT CTTCGTGTTC
CTGAACAGCA ATCTCGCGGG CGTCGCCGGG CTGCTGTTCG CGTACGTATG GACGCGGGCG
ACGCGGCCGT TCGGCGCGGA ACTCGCGGTG CGGCGATTGC TGCGCTCGGG GTGGGAGGAC
GTCGCACGCT CCGCGTCGAC GCAGCCGCTC GACGACCAGC GCAACCATGC GTCGCGCATG
CTCGATCGCG TCACGCAACT GCTGCCGCGC CTCGGCGCGT CCGACGACCA CCGCCATCCG
TCGATCGAGA GCTTCCGCGA CCTGCGCATC GCGCTGAACG CGCTCGACCT GCGCCGCTCG
CGCCGCAAGC TGTCGGGCGA CGTGCCGGAC GCGATCGACC GCGTGCTGGC CGGCGTCACC
GATTACTACA CGCGCTGCGC GGCCGCGAAC GCGCGCCAGC CGGCGCCGCC GGCACTGCTC
GCGTCGATCG ACGATGCGTT GCAGCGCGTG GCCGGCCGCA ACCTGCCGGG CGCGGCGGCC
GCACCGGCGG ACGACGGCAC GACGCCCGCG GCGCCAGCGG CCCCCGCCAC GCACCGCCGG
CTGCGCGACA CGCTGCATGC GCTCGTCGGC CTGCGGCTGT CGCTGTACCC GAGCGCGTCC
GCGCAGCCGC CGCAAGCGGC CCCGGACGGA GCACGCGCAT GA
 
Protein sequence
MTYPSLRDWL FSGKTFAASM LALYLGLYFQ LPRPYWAMAS VYIVSNPFVG ATRSKALYRA 
LGTALGAAAA ILFVPPFVET PLLFSVIVAT WCGTLLYLAI SDRTARSYVF MLAGYTMPLV
ALPTVTDPST VFDVAIARTE EIVLGIVCAS VVGSAVFPNR LAPTLIERTD AWFKDAAFYG
RETLSGHLAG KALSACRQRL AATITGLEFL LSQLSYDHAH PHVLARTQAL AGRMQLFLPL
MSSLADPLIA LMRDLHVRPP ALDALLADAA KWFDAPLPAL KDGTDGAMAD DPVADDLRAR
VAALQPPDSA LTSWDGALLS NALWRLRQVI DIWQDCRSLR ALIANESGVW QPRYRHWRLG
GTERFFDRGM MLFSTLTVAG AIVFACWLWI QSGWHDGAGA VTLVAVACSF FAALDEPAPL
VFKFFLATTA SVVFAGLYLF AVLPHVHDFA MLVLMFAGPF ILIGTLLPRP QFNMVTMLVA
VNTATFISIQ SAYEADFFVF LNSNLAGVAG LLFAYVWTRA TRPFGAELAV RRLLRSGWED
VARSASTQPL DDQRNHASRM LDRVTQLLPR LGASDDHRHP SIESFRDLRI ALNALDLRRS
RRKLSGDVPD AIDRVLAGVT DYYTRCAAAN ARQPAPPALL ASIDDALQRV AGRNLPGAAA
APADDGTTPA APAAPATHRR LRDTLHALVG LRLSLYPSAS AQPPQAAPDG ARA