| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5985 |
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| Symbol | |
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| ID | 4314889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 532687 |
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| End bp | 534054 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638153829 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_777863 |
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| Protein GI | 115360726 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CGACCGAACC TCTCGCCCCG CCGCCGGCTC CCGAACCGGA AACGATGCCA
TCTGCCGCGC GCGGCGCAGC GCCGGAAACA CCGCCGCCCC GGCGCGGCCG CAAGCTTGCC
GTCCCGCTTG CCGCGATTGC CGTCGCCGCC GCGCTGCTCG CGATCGGCAT CGTGCCGCGC
ATCGACGCGC GCGCCGCGCA GCGCCACCAG GTGGCGGCAC AGCAGGCGCT GCCGGTGACC
GTGCTCCAGC CCGGCGCCGC ACCGGCCGAC CAGACGCTCA CGCTGCCGGG TGCCGTGACG
CCGTATGCGG AGGCGTCGAT CTACGCGCGC ACGAGCGGCT ACATCGCCCA CTGGAGCGCG
GACATCGGCA CGCATGTGAA GGCCGGACAA ACGCTCGCGC AGATCACGGC GCCCGACCTC
GACGCGCAGT TGCGCCAGGC GCGCGCGGAC GCGGCGACCG CGCAAGCGAA CTACGACTAT
GCGAAATCGA CCGCGCAGCG CTGGCAGGAC ATGCTGAAGA CGCAATCGGT GTCGCAGCAG
GATACCGACA CGAAGGTGGC CGACATGAAC GCGAAGCGCG CGATGCTCTC ATCCGCGCAG
GCCAATACCG CCCATCTGAA CGAACTCGTG TCGTTCGAAT CCGTGACCGC GCCGTTCGAC
GGCGTGATTA CCGCGCGCAA CGTCGACGTC GGCACGCTCG TCACGGCGGG CGGCACGCCG
GGCAGCCCCG GGCTGTCGGG CGAGCTGTTC CATCTGGAGC AGACCGACAC GCTGCGCGTG
TTCGTCGACG TGCCGCAGGA CAGCGCGACC GGCGTCTCCA CCGGCACGGC CGTCTACCTG
ACCACGCAGC AGTATCCGGG GCGGCGCTTC GCCGCGCACG TCGCCCGCAG CGCGGGCGCG
ATCGACCCGG TCACGCGCAC GCTGCGCGTC GAGATCGACG TCGACAATCG CGATGGCGCG
TTGCTGCCCG GCGCGTATGC GCAGGCGCAC CTGCTCGTGC CGAGCGCGGC GCCCGCGTTC
GAGCTGCCGG TCAGTGCACT GCTGTACCGG CCGAACGGCG TGACGGTTGC AACGGTCGAC
GCGAATGGAC GCACGGCGCT GAAGACCGTG CAGATCGGGC GCGATTTCGG CACGCACGTC
GAGATCGTCG CGGGGCTCGG CGCGACCGAT CGCGTGATCG ACAACCCGGG CGATTCGATC
GCAAACGGCG AAACCGTGAA GATCGTGTCG GTCGAGCACG GCGCGGTGCC GGCCGCTGCG
CCGGCAGCGC AATCGGCCAC GGCAGGCGGT GCGCCGTCAG CGCCACGCGC GGCGACGTCC
ATGCCCGCCT CCGCGCCCGT TGCGCCTGCC TCGAACGCCC GCACCTGA
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| Protein sequence | MNDTTEPLAP PPAPEPETMP SAARGAAPET PPPRRGRKLA VPLAAIAVAA ALLAIGIVPR
IDARAAQRHQ VAAQQALPVT VLQPGAAPAD QTLTLPGAVT PYAEASIYAR TSGYIAHWSA
DIGTHVKAGQ TLAQITAPDL DAQLRQARAD AATAQANYDY AKSTAQRWQD MLKTQSVSQQ
DTDTKVADMN AKRAMLSSAQ ANTAHLNELV SFESVTAPFD GVITARNVDV GTLVTAGGTP
GSPGLSGELF HLEQTDTLRV FVDVPQDSAT GVSTGTAVYL TTQQYPGRRF AAHVARSAGA
IDPVTRTLRV EIDVDNRDGA LLPGAYAQAH LLVPSAAPAF ELPVSALLYR PNGVTVATVD
ANGRTALKTV QIGRDFGTHV EIVAGLGATD RVIDNPGDSI ANGETVKIVS VEHGAVPAAA
PAAQSATAGG APSAPRAATS MPASAPVAPA SNART
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