| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5979 |
|---|
| Symbol | |
|---|
| ID | 4314883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 523189 |
|---|
| End bp | 524439 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153823 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_777857 |
|---|
| Protein GI | 115360720 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTCA TCCACGCGGC AGACATTCAC CTTGACAGTC CGTTGCACGG CCTGAGCGCG
TATCCCGACG CGCCGGCCGC GCAGTTGCGC AACGCGTCGC GCGAGGCGCT GCGGCAACTC
GTGGATCGTG CGATCGAAGA GGAGGTTGCG TTCCTCGTGA TCGCCGGCGA CCTGTACGAC
GGCGACTGGA AGGACCACAA CACCGGCATT TTCTTCGGCC AGCAAATGGG CCGCCTGCGC
AAGGCCGGCA TTCGCGCATT CGTTCTCGGC GGCAATCACG ATGCCGAAAG CGAGATGACG
AAGAAGCTCA CGTTGCCCGA CAACGTCACC GTGTTCGGCC ACCGCAAGCC GGAAACCCAC
CGACTGCCGG AATTCGACGT GGCGCTGCAC GGGCAGAGCT TCAAGGACAA GGCCGTCGTC
GACAATCTCG CGATCGGCTA TCCGGACCCG GTGCCGGGTT ACTACAACAT CGGCGTGCTG
CACACCGCGC TCGAAGGCTA TGCGGCGCAT GCGAACTATG CGCCGTGCAC GCTGGCGGAG
CTGCACGCGA AAGGCTACGA CTACTGGGCG CTCGGCCACG TGCACGAGTT CCAGCAATGG
TCGGGGCCGT CGACCGTCGT GTTTCCCGGC AACCTGCAGG GCCGCCATAT CCGCGAGACG
GGCCGCCGCG GCGCAGTGCT CGTGACGATC GAGCAGGGGC GCACGCACCT CGAACGTCTG
TACCTCGACG TGTTGCGCTG GGAAGCCGTG TCGGTCGACG CGTCCGACTG CTTCACGGTC
GCCGACCTGT CGAGAAAGAT CGGCCAGTCG CTGGAGGCGC TGCTGAACGT CGATGGCCAC
GTGCCGCGCG CGGTGCGCGT GACGGTCACG GGGCGTACGC CCGCGCACGG CCTCTTTTTC
GGGCGCGCGC CGCAACTGCG CGCGGAGGTG CTGAACCAGA TCGGCATCAT CGGCAACGAA
CGGTTGTGGC TGGAGAAGGT CCGGCTCGCG ACGTCCGCGC CCGAGCAGCC GCAAGGAGAG
AGCGAGCAAC TCGAGGCGCT GGAGGATCTC AAGCAGATCC TGGCCGACGC CGCGCACGAT
CCGGATTTTC TCGCGCTGCT GGAGCGCGAC CTGAAGCCGT TCATCGGCAA GGTGCGCAGC
GACGTGAAGG AGGAGGTGCC GCTGCTGACG ATGGCCCGCG CCGGCGAACT CACGGCGCTG
GTCGAGCAGG TGGGCCCCGC GTTGCTCGCG CGGCTGGCGA GGGGGGAATA A
|
|---|
| Protein sequence | MKFIHAADIH LDSPLHGLSA YPDAPAAQLR NASREALRQL VDRAIEEEVA FLVIAGDLYD
GDWKDHNTGI FFGQQMGRLR KAGIRAFVLG GNHDAESEMT KKLTLPDNVT VFGHRKPETH
RLPEFDVALH GQSFKDKAVV DNLAIGYPDP VPGYYNIGVL HTALEGYAAH ANYAPCTLAE
LHAKGYDYWA LGHVHEFQQW SGPSTVVFPG NLQGRHIRET GRRGAVLVTI EQGRTHLERL
YLDVLRWEAV SVDASDCFTV ADLSRKIGQS LEALLNVDGH VPRAVRVTVT GRTPAHGLFF
GRAPQLRAEV LNQIGIIGNE RLWLEKVRLA TSAPEQPQGE SEQLEALEDL KQILADAAHD
PDFLALLERD LKPFIGKVRS DVKEEVPLLT MARAGELTAL VEQVGPALLA RLARGE
|
|---|
| |