| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5964 |
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| Symbol | |
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| ID | 4314868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 498994 |
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| End bp | 500502 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153803 |
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| Product | NCS1 nucleoside transporter |
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| Protein accession | YP_777842 |
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| Protein GI | 115360705 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0145337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.627469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAG CAGCGATTCC CGCCGATGCC GACAGCGCCG CGGCGCCGGC CGGCAGCCTG
TACAACGACG ACCTCGCGCC GACGACGGCC GCGCAGCGCA CATGGCGGTG GTATCACTTC
GCGGCGCTAT GGGTCGGGAT GGTGATGAAC ATCGCGTCGT ACATGCTCGC GGCCGGGCTG
ATCCAGGAAG GCATGTCGCC GTGGCAGGCT GTGCTGACCG TGTTGCTCGG CAATCTGATC
GTGCTCGTGC CGATGCTGCT GGTCGGCCAT GCGGGCGCGA AGCACGGGAT TCCGTACGCG
GTGCTCGTGC GCGCGTCGTT CGGCACGCAG GGGGCGAAGC TGCCGGCGCT GCTGCGCGCG
ATCGTCGCGT GCGGCTGGTA CGGCATCCAG ACCTGGCTCG GCGGCAGCGC AATCTACACG
CTGCTGAACA TCCTGACCGG CAATGCGCTG CACGGCGCGG CGCTGCCGAT CATCGGCATC
TCGTTCGGGC AGCTCGCGTG CTTCCTGGTG TTTTGGGCGC TGCAGCTGTA CTTCATCCTG
CATGGCACCG ATTCGATCCG CTGGCTCGAG AGCTGGTCCG CGCCGATCAA GGTCGTGATG
TGCGTCGCGC TCGTGTGGTG GGCGACGTCG CAGGCGGGCG GCTTCGGCTC GATGCTGTCG
GCGCCGTCGC AGTTCGTCGC GGGCGGCAAG AAGGCGGGAC TCTTCTGGGC GACGTTCTGG
CCGGGCCTGA CCGCGATGGT CGGCTTCTGG GCGACGCTCG CGCTGAACAT TCCCGACTTC
ACGCGCTTCG CGCATTCGCA GCGCGACCAG ATCATCGGTC AGTCGATCGG GCTGCCGCTG
CCGATGGCGC TGCTGTCGGT GGTGTCGGTC GTCGTGACGT CGGCGACCGT CGTGATCTAC
GGCAACGCGA TCTGGGATCC GATCGACCTG ACGAGCCGGA TGACCGGCAT CGGCGTCGGC
ATCGCGCTGG TGATCCTCAC GCTCGACACG ATGTGCTGCA ACCTCGCGGC GAACCTCGTC
GGCCCCGCCT ACGATTTCTC GAGCCTGTGG CCGAAGGCGA TCTCGTATCG CACCGGCGGG
ATGATCACCG CGACGATCGC GATCGTGATG ATGCCGTGGA AGATCCTCGC GACGACGGAT
GGCTACATCT TCACCTGGCT CGTCGGTTAT TCGGCGCTGC TGGGCCCGGT CGCGGGCATC
CTGATGGTCG ACTACTTCCT GATTCGCGGC ACGCGGCTCG ATACGCACGC GCTGTTCGAC
GAGCGCGGCG ACTTCAGCTA TGCGCGCGGC TGGAACCCGG CCGCGCTGGC CGCGCTCGCG
ATCGGCGTGC TGCCGAACCT GCCCGGCTTC CTGCACACCG CATTCCCGGC GTCGTTCCCC
AACGTGCCGG CCTTCTTCAA CACGCTCTAC ACGTACGCGT GGTTCGTCGG CCTCGTGCTG
GCGTCCGGCG TGTACGGCAC CTGGATGAAG TGGCGCGCCG CCCAGCGCGC GCAGATCGCG
AGCGCGTGA
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| Protein sequence | MKPAAIPADA DSAAAPAGSL YNDDLAPTTA AQRTWRWYHF AALWVGMVMN IASYMLAAGL
IQEGMSPWQA VLTVLLGNLI VLVPMLLVGH AGAKHGIPYA VLVRASFGTQ GAKLPALLRA
IVACGWYGIQ TWLGGSAIYT LLNILTGNAL HGAALPIIGI SFGQLACFLV FWALQLYFIL
HGTDSIRWLE SWSAPIKVVM CVALVWWATS QAGGFGSMLS APSQFVAGGK KAGLFWATFW
PGLTAMVGFW ATLALNIPDF TRFAHSQRDQ IIGQSIGLPL PMALLSVVSV VVTSATVVIY
GNAIWDPIDL TSRMTGIGVG IALVILTLDT MCCNLAANLV GPAYDFSSLW PKAISYRTGG
MITATIAIVM MPWKILATTD GYIFTWLVGY SALLGPVAGI LMVDYFLIRG TRLDTHALFD
ERGDFSYARG WNPAALAALA IGVLPNLPGF LHTAFPASFP NVPAFFNTLY TYAWFVGLVL
ASGVYGTWMK WRAAQRAQIA SA
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