Gene Bamb_5900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5900 
Symbol 
ID4314805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp381466 
End bp382863 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content70% 
IMG OID638153740 
Productsodium/sulphate symporter 
Protein accessionYP_777779 
Protein GI115360642 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.500166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.020602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGGCG GTGCGCTCGG CGGGCCGGGC CGCGGCACCG GCATGCTGAC GGGCGGCCGC 
GTCACGGCCG CGCTGCTCGT GGCGGGGCTC GCGAGCGTCG CCGCGCTCGG CGCGCGCGGC
ACGCTGTCGG CCGGCGACGC ACGCATCGTC GCGATTGTGT TCACCTGCAT CGTGCTGTGG
GCGACTGGCG CCGTCGCGAG CCTGTGGGTG TCGCTGCTGT TTTTCTTCCT CGCGGCGACC
TGCACGGCGG TGCCCACCGC CGAGATCTTC TCCGGCTTCG GGTCGAGCGC GTTCTGGCTC
GTGTTCAGCG GCGCGGCGAT CGGCTTCGCG CTGAAGGAGA GCGGCCTGAG CGAACGGATC
GGCATCGCGC TCGCGCGCCG GATCGGCGGC TCGTATCTGA AGGCGCTGCT CGCATTCGCG
ATCCTGAGCT TCCTGCTGTC GCTCGTGATG CCGTCGACGT TCGGGCGGAT CGCGATCCTG
GTTCCGATCG CGATCGGCTA CTGCGACGTC GTGAAGCTCG GCGCGCACGC GAACGGGCGG
CGCGGCATCC TGCTGCTCGT GATCGTCGGC TCGTACGAGC TGGCTGCCGC GGTGCTGCCC
GCGAACCTGC CGAACGTGAT CATGGCGGGG ATTCTCGAGC AGTCGCACGG GATGCATCTG
CGCTTCTCCG AATATCTGCT GCTGTTCTTT CCGGCCGGCG TGATCGTGCG GGGCGCGGTG
CTGGTGCTCG CGTCCTGGTG GCTGTTCGCG GATACGGTCG GCGAAGTCGA GATACCGGCG
GCGCGCGTCG CGCTCGGCCG CCGCGAATGG CACGCGATCG TGCTGCTGGC GATCACGCTC
GCGTTCTGGT TCACCGACGC CGTGCATCGC ATCGCGCCCG GCTGGGTCGG GCTCGGCTTC
GCGCTCGTCT ACTTCGGCAC GTCGCCGCCC GCGCAGCTCG AGCGCTTCAC CGCGACGCTG
AAGATGGACC TGCTGTGGTT CATCGCGGCG ATCATCGGGC TGACCGCGCT CGTCAACCAT
CTCGACGTGC GCGTGCCGGA CACGCTCGCG CTCGACGCGC TGCGCGACAG CCCGATGCTC
ATGTACTTCG CGCTGACCGC GCTGTCGATC GTCGTCTGCT TCGCGGTCAC GTCGAATGCG
GAACCGGCGC TGTACGTGCC GATCGTGTCG CGCCTGCTCG CGCAGGGGCT GCACCTGAAG
GCCGGCCTGC TCGCGCAGGT GATGGGCTAT GCGACCACGG TCCTGCCGTA CCAGTCGCCG
CCGATCGTGT TCGGCAACGC GCTCGCGCAG CTGGACCGGG GTGCGGTGCT CCGGTACTGC
ATCGCGACGG CGCTGCTGGG CGTGGTGTTC GTGATCCCGG TCAATGCGTT GTGGTGGCGG
CTGATCGGGC TGCTGTGA
 
Protein sequence
MSGGALGGPG RGTGMLTGGR VTAALLVAGL ASVAALGARG TLSAGDARIV AIVFTCIVLW 
ATGAVASLWV SLLFFFLAAT CTAVPTAEIF SGFGSSAFWL VFSGAAIGFA LKESGLSERI
GIALARRIGG SYLKALLAFA ILSFLLSLVM PSTFGRIAIL VPIAIGYCDV VKLGAHANGR
RGILLLVIVG SYELAAAVLP ANLPNVIMAG ILEQSHGMHL RFSEYLLLFF PAGVIVRGAV
LVLASWWLFA DTVGEVEIPA ARVALGRREW HAIVLLAITL AFWFTDAVHR IAPGWVGLGF
ALVYFGTSPP AQLERFTATL KMDLLWFIAA IIGLTALVNH LDVRVPDTLA LDALRDSPML
MYFALTALSI VVCFAVTSNA EPALYVPIVS RLLAQGLHLK AGLLAQVMGY ATTVLPYQSP
PIVFGNALAQ LDRGAVLRYC IATALLGVVF VIPVNALWWR LIGLL