| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5897 |
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| Symbol | |
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| ID | 4314802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 377439 |
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| End bp | 378611 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153737 |
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| Product | outer membrane protein (porin)-like protein |
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| Protein accession | YP_777776 |
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| Protein GI | 115360639 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0466663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC GATTTGCACT AGGCGCGGCC TGTCTCGCGC TCGGCGCCGG CAACGCGCGT
GCCGTGCCCT ATCAGGACGT GTTGCTTGCG GCGGTGCCCG AGTACAACGG TCGCCTGACC
GAGGGGGTCG CGCTATACGG CTCGCTCGAC ATGGGGATCA ACTACCAGAC GGTCGGCGGC
CATTCGCTGT GGCAGACGCA GAGCGGCGGC GAGTGGACCT CCAAATTCGG CTTCTTCGGC
CGCGAGAACC TCGGTGGCGG CTGGCGCGCC GAGTTCAACC TCGAAAGCGG TTTTCTCGCG
AACAACGGCG CGCAGCAGGA CAAGCAGTCG ACTTACAACC GGCAGTCGTG GGTCGGCCTG
TCGTCGGACA GCTACGGGCG TCTGCGTCTC GGTAAGCAGA TCGGCACGGC GCTGCCGTTG
TTCGTCGACG TGTTCGGCAC GGTGGGCACG AACTCGGTCT ATACGTGGCT GGGCGCGGCG
GTCGTGCAGA CGAGCCGCGG CGTCAGCTAC AACTCGGACC TCGGGCCAGG GGCGACGCAA
TTGCCTGCGC GCGTCGACAA CGCCGTCACG TACCGTACAC CGATCGTCGC GGGCACCACG
TCGCTGATGC TAATGTATGC GCCGAGCAAC GTTGCCGGGC GCGCGCCCGC GGCGTCCGCG
CAAGGCGCGC TGCTGCAGTG GTACAACGGC ACGACCTATC TGGCCGCGAG CTACAACCAG
GTGTGGGGCG TCAACGGGGC GAGCACCGTG CGCAACGACC TGTACGGGCT CGGCGCCGTC
TATGACACGG GGCGGATCGT GCTGTCCGCA TCGTTTAACC AGTACGCGCC GAAGCTGGCC
GGCGACGGCA TCGCGCGTGT CTACACGGTC GGCGCGATCG TGCCGTTCGG CGTCAATGCG
ATTCGCGCGT CGGTCGTCTA TCGCGATACG TCGGGCGTAC GTGACGCGGC CGGCCAGCCG
GCCAAGGACT CTGCGCTCGG TGCGATGCTC GGCTATGACT ACCTGCTGTC GAAACGCACG
GGCCTCTATG CGCGCGCGGG GTTCATCCGC AACTACGGCA TCTCGACCGT GTTGCTGAAC
GGCAACCCGC TGCCGACCGA ACCGGGCGGA ACCGCACCGC GCACCGGGAC GACACCCGTG
ACCGTGTCGC TCGGCATGTA TCACAACTTC TGA
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| Protein sequence | MKKRFALGAA CLALGAGNAR AVPYQDVLLA AVPEYNGRLT EGVALYGSLD MGINYQTVGG
HSLWQTQSGG EWTSKFGFFG RENLGGGWRA EFNLESGFLA NNGAQQDKQS TYNRQSWVGL
SSDSYGRLRL GKQIGTALPL FVDVFGTVGT NSVYTWLGAA VVQTSRGVSY NSDLGPGATQ
LPARVDNAVT YRTPIVAGTT SLMLMYAPSN VAGRAPAASA QGALLQWYNG TTYLAASYNQ
VWGVNGASTV RNDLYGLGAV YDTGRIVLSA SFNQYAPKLA GDGIARVYTV GAIVPFGVNA
IRASVVYRDT SGVRDAAGQP AKDSALGAML GYDYLLSKRT GLYARAGFIR NYGISTVLLN
GNPLPTEPGG TAPRTGTTPV TVSLGMYHNF
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