Gene Bamb_5823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5823 
Symbol 
ID4314729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp292492 
End bp293604 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content70% 
IMG OID638153664 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_777703 
Protein GI115360566 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC TGCTCAGCAC CTATGATCTG CGCGGCCTGC CGCTGCCCAA CCGAGTCGTG 
ATGGGGCCGA TGACGCGCTC GCGCGCACCG TCGCGCGGCC TGCCGACCGC GCTCATGGCC
GAGTATTACG CGCAGCGCGC GTCCGCCGGC CTGATCGTCA CCGAGGCGAC CAACGTCAGC
CACACGTCCG CCGCGTTCGA ACTGACGCCC GGGCTCGTCA CCGACGAACA GGCGGCCGGC
TGGAAGCAGG TCACGGACGC AGTCCATGCG AACGGCGGCC GCATCTTCGC GCAGTTGTGG
CACGGCGGTC GCGTCAGCTC GCTGACGCTG CTCGGCGGCG ACGCGCCGCT GTCGCCGTCC
GGCATCAACG ACGATCTCGA GCAGTTGCAG GTGTGGGCCC GGTTGCAGAA CGGCTACTAC
ACGAAGATTC ACGCGACGCC GTCGCGCGCG ATGACGACGG ACGAAGTCGC CGCGACGGTC
GACGACTTCG GCCGCGCGGC CGCCCGCGCG ATGGCGGCCG GCTTCGACGG CGTCGAGATC
CACGCGGCCA ACGGCTACCT GCCGCACCAG TTCCTGTCGT CGACGCTGAA CCGCCGCGAC
GACCGCTACG GCGGCTCGGT CGCGAACCGC GCGCGCTTTC TCGAGGAGAT CGTCGACGCG
GTCGGCGACG TGATGCCGCT CAGCCGTGTG GGCGTGCGCA TCTCGCCGTA CGCGCAATAC
AACAACGTGC GGGACGCGGA TCCCGATGCA ACGTACGCGT ACGTCGGCCG CATGCTCGAC
GAAGCGGGCG TCGCCTACCT GCACGCGGCC GATACCAACG GCTGGAGCGG CGAGCCCGAC
CTGCCGCGCA TCATCGAGCA CACGCGCAAG ACCTTCAGCG GCACGCTGAT CGTCAATGGC
GGCATCACGC CGGACGCCGC GAATGCGCTG ATCGATGCGG GCGACGCCGA TCTCGTCGCG
TTCGCGCGTG CGTACATCGC GAACCCGGAT CTCGTCGAAC GCATCGCCAT GCATGCCCCG
CTCGCCGTGC CGAAGTCGAT CGGCTGGTAC GGCGGCGAGC GTGCGGGATA CGTCGACTAT
GCGCGGCACG ACGCGGCGGC ACCGACCGCC TGA
 
Protein sequence
MSSLLSTYDL RGLPLPNRVV MGPMTRSRAP SRGLPTALMA EYYAQRASAG LIVTEATNVS 
HTSAAFELTP GLVTDEQAAG WKQVTDAVHA NGGRIFAQLW HGGRVSSLTL LGGDAPLSPS
GINDDLEQLQ VWARLQNGYY TKIHATPSRA MTTDEVAATV DDFGRAAARA MAAGFDGVEI
HAANGYLPHQ FLSSTLNRRD DRYGGSVANR ARFLEEIVDA VGDVMPLSRV GVRISPYAQY
NNVRDADPDA TYAYVGRMLD EAGVAYLHAA DTNGWSGEPD LPRIIEHTRK TFSGTLIVNG
GITPDAANAL IDAGDADLVA FARAYIANPD LVERIAMHAP LAVPKSIGWY GGERAGYVDY
ARHDAAAPTA