Gene Bamb_5806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5806 
Symbol 
ID4314712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp274845 
End bp275537 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID638153647 
Producthypothetical protein 
Protein accessionYP_777686 
Protein GI115360549 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.740879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCTG AAGACACCCT TCTTTCCGCG GTCGCCGGGT TCGTCGATAC GCTGAGCTTC 
GTCTCGCTGT TCGGGTTGTT CACCGCACAC GTGACGGGCA ACTTCGTGCT GATCGGCGCC
GGCGTTGCCG GATTCGGGCA GGGCCTCGTG CTGAAACTGA GCGTGTTTCC CGCCTTCATA
TGCGGCGTCA TCGCGGCGAG CCTGATCGCG CGGTCGTTGT CCGCGCGGCC GGCATGGCAA
GGCGCGCGTG CGCTGTATGC GGTGCAGGCC GTGATGCTGC TCGGCTTCTG TGCGGCCGGC
GTATGGGCGA CGCCCGTCAC GCAGTCCGAC AGCCTGCCGG TGCTGTTGGC CGGCATCGTC
GGCACGTTCG CGATGGGCGT GCAGAACGCG CATCCGCGCG TGATCGCGCG CGCAAGCGTG
CCGAACACGG TGATGACGGG CAACGTCACG CAGGCGATTC TCGATGTCGT CGACCTGTTG
TCGGCCGGCA CGGCCGACAG CGCGCGCGTG GCCGCACGCG CACGCTTCGG CAAGATGCTG
CCGGCGATCG TCGCGTTCGC GCTGGGCGCA ATGGCGGGCG CGCTCGGCTT TCGCTACATC
GGATTCTGGG CGCTGCTCGC GCCGGCCGGC GCGCTTGCGG CACTGGCATT GACGTCCGGC
GCGCATGACG CGGCGCCTGC CGTGCGGACC TGA
 
Protein sequence
MKSEDTLLSA VAGFVDTLSF VSLFGLFTAH VTGNFVLIGA GVAGFGQGLV LKLSVFPAFI 
CGVIAASLIA RSLSARPAWQ GARALYAVQA VMLLGFCAAG VWATPVTQSD SLPVLLAGIV
GTFAMGVQNA HPRVIARASV PNTVMTGNVT QAILDVVDLL SAGTADSARV AARARFGKML
PAIVAFALGA MAGALGFRYI GFWALLAPAG ALAALALTSG AHDAAPAVRT