Gene Bamb_5676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5676 
Symbol 
ID4314566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp117576 
End bp117974 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID638153518 
Producthypothetical protein 
Protein accessionYP_777557 
Protein GI115360420 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.304221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC TGGATACGAA CGTGCTGGTC CGCTACTTTG CCCAGGACGA CGTCGTTCAG 
TCGAAGAAGG CGACGGCATT GATGGAGTCC CTGTCGGCCG AATCGCCGGG GTACGTTTCG
CAGGTCGCAT TGGTCGAGGT CGTTTGGGTG CTCGGGCGCT GCTACGGCGT TGAGCGAGAG
CAGATGAAGG ACATCATCGA CTCGATGATC GGCACCAAGG AGTTGATGGT TGAAGGCGCG
GACACGGTGC GAAAGGCACT TCGCGTTTTC GCTGCATCCG CGAAGGCGGA TTTCGCGGAC
TGCCTGATCG AGCGTTCAGG GCATGTAGCC GGCAGCGAGT ACACGGCTAC TTTCGATGTG
ACAGCGTCGA AGGTCGCAGG GATGCAGTTG ATCAAGTAA
 
Protein sequence
MIGLDTNVLV RYFAQDDVVQ SKKATALMES LSAESPGYVS QVALVEVVWV LGRCYGVERE 
QMKDIIDSMI GTKELMVEGA DTVRKALRVF AASAKADFAD CLIERSGHVA GSEYTATFDV
TASKVAGMQL IK