| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5612 |
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| Symbol | katE |
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| ID | 4314607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 48194 |
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| End bp | 50302 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153454 |
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| Product | hydroperoxidase II |
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| Protein accession | YP_777493 |
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| Protein GI | 115360356 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase
[COG0753] Catalase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.249149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC CCCCGCAATC CGGCAATCCG ACGCCCAATC CGCCGCAACC CGACAGCGCG
AAGTCGCGCC AGCTCGACGA GAATCGGCTG CGGCCCGACG GCGAGGCGCT GCGCACCAAC
CAGGGCGTGC GCATCGCCGA CAACCAGAAC ACGCTGCGCG GCGGTGCGCG CGGCCCGTCG
CTGCTCGAAG ACTTCATCAT GCGCGAGAAG ATCACGCACT TCGATCACGA ACGGATTCCC
GAACGGGTCG TGCACGCGCG CGGCTCGGCC GCGCACGGCG TGTTTCGCGT CTACGAGCCG
ATGGCCGACT ACACGAAGGC CGCGTTCCTG CAGGACCCGG CCGCCGAAAC GCCGGTGTAC
GTGCGCTTTT CCACCGTGCA GGGCCCGCGC GGCTCGGCCG ACACGGTGCG CGACGTGCGC
GGCTTCGCGG TGAAGTTCTA TACCGAAGAG GGCAACTACG ACCTGGTCGG CAACAACATG
CCGGTGTTCT TCATCCAGGA CGCGATCAAG TTTCCCGACT TCGTGCACGC GGTGAAGCCC
GAGGCGCCGA ACGAGATGCC GACCGGTGCG TCCGCGCACG ACACGTTCTG GGATTTCGTA
TCCCTCGTGC CCGAAACCAC GCATACGGTG CTGTGGCTGA TGTCCGACCG CGCGCTGCCT
GCGAGCTTCC GCGCGATGGA CGGCTTCGGC GTGCACACGT TCCGCTTCGT GAACGCGGCC
GGCGCCGAGC ATTTCGTGAA GTTCCACTGG CGGCCCGTGA GCGGCGCGTA TTCGCTGCTG
TGGGACGAAG CGCAGCGCAT CGCCGGCCAC GACCCCGATT TCAACCGGCG CGACCTGTGG
ATGGCGATCG AGCGCGGCGA CTATCCGGAG TTCGAGCTCG GCGTGCAGCT GATCGATCCC
GCCGACGCGA ACAAGTTCGA TTTCGATCTG CTCGACCCGA CCAAGCTGGT GCCGGAGGAA
CTCGTGCCGG TGCGCCCGAT CGGCCGCATG ACGCTGAACC GCAACCCGGA CAACTTCTTC
GCGGAGACCG AGCAGGTCGC GTTTCACCCG GGGCACGTGG TGCCCGGCAT CGACTTCACG
AACGATCCGC TGTTGCAGGG GCGCCTGTTC TCGTACACCG ACACGCAGCT GAGCCGGCTC
GGCGGCCCGA ACTTTCACGA GATTCCGATC AACCGGCCGG TGTGCCCGTT CGCGAACAAC
CAGCGCGATG CGATGCACCG GCAGACGATC GCGGTCGGGC AGGCGTCGTA CGAACCGAAT
TCGCTGAACG GCGGCTGGCC GCGCGAGACG CCGCCCGCGC CGTCCGGCGG CGGCTTCGAG
ACGGTGCACG AACCGCTCGA AGGCGACAAG GTGCGCGTGC GCAGCGAAAC GTTCGCCGAT
CATTTCTCGC AGCCGGCGCT GTTCTACCAG AGCATGACCG AGATCGAGCA GCGGCATATC
CGCGACGCGT ACTGCTTCGA GCTCGGCAAG GTGACGAAGC CGGAGATTCG CGAGCGCGTG
GTCAACGAGA TCATCGCGCG ATTCGACGCG GGGCTGGCCG CGCAGGTCGC CGAACGGCTC
GGGCTGCCGG CGCCGCAAAC GGCCACGACG CCGGCAGTCA AGCAGCGCGC GCCGTCGTTG
AGCCTGATAG GCCGCTCGAA GCCCGGTATG CGCTCGCGCA AGATCGCGCT GATCGCGACG
CCCGGCGTGA GCCAGACGCT CGTCGAGCAG GTGCGCGGCG CGCTGACGGC CGCGGGCGCG
GTGCCGACGA TCGTCGCGCC GACCCTCGCG CCGATCGGCA GCATCGTGCC GCAGGCGACG
CTCGCCGGGA TGCCGTCGGT GATGTTCGAC GCGGTGTTCG TGTGCGGCGG CGACGGCGAT
GGCCGAAATC TCGCGCACAG TGCCGACGCG CGGCACTTCG TGCGCGAGGC GTTCAAGCAC
CTGAAGCCGA TCGCGGCGGT CGGCTCCGGG CGTCAGTTGC TGAGCGCCGC GCATCTGCCG
GATCCGGCCG AAGGCGTGTG CGTCGCGCAA GCGGCCGATC TCGACGCGTT GCTGCGCACG
TTTTCGGACG AGATCGGCCG GCATCGGGTC TGGTCGCGCG AGCAGCAGGC GGCCGAGCTG
CCGGCATAG
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| Protein sequence | MTNPPQSGNP TPNPPQPDSA KSRQLDENRL RPDGEALRTN QGVRIADNQN TLRGGARGPS
LLEDFIMREK ITHFDHERIP ERVVHARGSA AHGVFRVYEP MADYTKAAFL QDPAAETPVY
VRFSTVQGPR GSADTVRDVR GFAVKFYTEE GNYDLVGNNM PVFFIQDAIK FPDFVHAVKP
EAPNEMPTGA SAHDTFWDFV SLVPETTHTV LWLMSDRALP ASFRAMDGFG VHTFRFVNAA
GAEHFVKFHW RPVSGAYSLL WDEAQRIAGH DPDFNRRDLW MAIERGDYPE FELGVQLIDP
ADANKFDFDL LDPTKLVPEE LVPVRPIGRM TLNRNPDNFF AETEQVAFHP GHVVPGIDFT
NDPLLQGRLF SYTDTQLSRL GGPNFHEIPI NRPVCPFANN QRDAMHRQTI AVGQASYEPN
SLNGGWPRET PPAPSGGGFE TVHEPLEGDK VRVRSETFAD HFSQPALFYQ SMTEIEQRHI
RDAYCFELGK VTKPEIRERV VNEIIARFDA GLAAQVAERL GLPAPQTATT PAVKQRAPSL
SLIGRSKPGM RSRKIALIAT PGVSQTLVEQ VRGALTAAGA VPTIVAPTLA PIGSIVPQAT
LAGMPSVMFD AVFVCGGDGD GRNLAHSADA RHFVREAFKH LKPIAAVGSG RQLLSAAHLP
DPAEGVCVAQ AADLDALLRT FSDEIGRHRV WSREQQAAEL PA
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