| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5572 |
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| Symbol | |
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| ID | 4314461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2644639 |
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| End bp | 2646282 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153414 |
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| Product | glycoside hydrolase family 13 protein |
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| Protein accession | YP_777453 |
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| Protein GI | 115360315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATT GTTCGCACGA TCCGTATGCG CAGCACTACA TTCACTGCCT GCCGTTCGGC
GCGCAGCCCT GCGGCGCGCT CGGCAAGTCG CCGCGCACGC ATTTCCGCGT GTGGGCGCCG
GCCAGCATGC ACGTTCAGCT CGAACTCGAT ACCGGTAATG GCACGACGCT CGTCCCGATG
ACGGCCGCCG GTCGGAACTG GTTCGAAGCG TTCGTCGAAT GCGGTGCGGG CGCGCGTTAC
CGTTATCGGC TCGACGATGT CGTGTCGATT CCCGATCCCG CGTCGCGTTC GCAGCCCGAC
GGGCTCAACG GCCCGAGCGA GGTCATCGAT CCGCGCGCGT TCACTTGGCG CAACACGTTC
TGGCGCGGAC GTCCGTGGGA AGACATCGCG CTGTACGCGA TCCGTCCGCA CGCGGTGGGC
GGCTTCGACG GCGTGCGCCG CCGGCTGCCG CAGCTCGCGC GTCTCGGCGT GACCGCGCTG
GAGTTGCTCG CGTCACCGCA CGACAGCCTG CCGTTCGCCC CGCTCGCGGT CGAGGGCGGC
CCCGATGCAT TGAAGGCGCT GATCGACGAC GCGCACGGCT ACGGTCTCGC GGTGCTGCTG
GAGCTCGATT ACGCGCGCTT CGGCAGCGGC ACCGACGCAC TGCGCCATTA CGCGGTGCCG
TTCTTCCATA CGCGCGACGA TCCGCTGCAG GCGCCGCCGC TCGCGCTCGA TCATCCGGAA
GTCTGCGACT TCTTCTGCGA CAACGCGATG TACTGGATCG ACGAATACCG TTGCGACGGG
CTGCGGCTGC GCGAGGCCGA CCGGATCGGC ACGTCGTGGC TGCGCGAGAT CGCCGACCGC
GTGCGCGCGG CCGTGCCGGC CGACCGGCTG ATCCACCTCG TGCTCGGCAG CGAGCGTCAT
CCGGTGCATC TGGCCGATAC CCATTTCGAT GCCCAGTGGA ACGGTTGCGG CGAACGCGCG
CTGCATCGGT TGACGGACCG CGGCACGACC GCGCACGAAG GGATTTCGGC ACACCAGTCG
ATCCATACGC TGGCCCGTGC ATTGACCGCG GCCGGCGCGG CGTTCCAGCC GGCCGCCACT
GCCGACGGCC CCTGCGCCGA AGGGCTGGCG TTGACCTCGC TGGTGCTGTC CGACGGCGTA
TGGCGCGAGA GCGAGCATGG CGAGCTCGAG ACGCCGGGGC TCGCCGCGCT CGCGCTGTCG
CTGCTGACGC CGCAGATCCC GCTGATCTTC GACGAAACCG CGCGCGATGC CGATCGGGCG
CATTTCGTGC AGTCGGCGCT TGCCGTGCGC GCGAAGCTGA TCGCCCCGCG GCTGGCCGAT
TGCCGGCCGC GGGACGCGCA TACGTTGAAG GCGGGTGGTG ATGGCGATGC CGATGCGCTG
GTGGCGTCGT GGCAGCTCGC CGACGACGAG ACGCTCACCA TCGCACTGAA CCTGTCACCC
GACGCGCTGC CGTTCGATGC GCCAAGAGGG CAGATCGTGT TCGAGACGCC GGCGCGCGCA
CGCGACCGGA TCGACGAGGG CGATTTGCCG CCGTATTCGC TCGTTGCGTG GCTGACGGGG
GACGTCAACC ACTACGCGCT CACGCACGAC GTGCGCCGGC TCGACGACAG CACATGGCGC
GGCATGCGCG CCGATCTGAA CTGA
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| Protein sequence | MSDCSHDPYA QHYIHCLPFG AQPCGALGKS PRTHFRVWAP ASMHVQLELD TGNGTTLVPM
TAAGRNWFEA FVECGAGARY RYRLDDVVSI PDPASRSQPD GLNGPSEVID PRAFTWRNTF
WRGRPWEDIA LYAIRPHAVG GFDGVRRRLP QLARLGVTAL ELLASPHDSL PFAPLAVEGG
PDALKALIDD AHGYGLAVLL ELDYARFGSG TDALRHYAVP FFHTRDDPLQ APPLALDHPE
VCDFFCDNAM YWIDEYRCDG LRLREADRIG TSWLREIADR VRAAVPADRL IHLVLGSERH
PVHLADTHFD AQWNGCGERA LHRLTDRGTT AHEGISAHQS IHTLARALTA AGAAFQPAAT
ADGPCAEGLA LTSLVLSDGV WRESEHGELE TPGLAALALS LLTPQIPLIF DETARDADRA
HFVQSALAVR AKLIAPRLAD CRPRDAHTLK AGGDGDADAL VASWQLADDE TLTIALNLSP
DALPFDAPRG QIVFETPARA RDRIDEGDLP PYSLVAWLTG DVNHYALTHD VRRLDDSTWR
GMRADLN
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