Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5523 |
Symbol | |
ID | 4314412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2593063 |
End bp | 2594925 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153365 |
Product | ABC transporter related |
Protein accession | YP_777404 |
Protein GI | 115360266 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAA AAACCACCCA TCTGGGCGGC CAGGCATTCC AGGCCGTCTT CGGCTTCACT TTCCGCTACT GGCGCAAGCA GCCGGTACGC ATCGCGACGA TCACCGCACT CGCGCTGCTC GGTGCGCTCG CCGACGTGCT CACGCCGCTG TTCGCCGGGC GCCTCGTCGA TGCGCTGTCG ACCGGCCTGA CCGAGCGCGC CGCCGCGTGG CATTCGGCCC TCGCCGCGTT CGGCACGCTG GCCGCGCTCG GCATCGCCGC GACGCTGCTG CGGCAAGGCG TCTACCTGAA CATCATCACG CTCACGCTGA AGATGATGAG CGAGATCGCC GCCGCGTCGT TCCATCGCGT GCAGCGCTTC TCGACCGACT GGCACGCGAA CAGTTTCGCG GGCTCGACCG TGCGCAAGAT CACGCGCGGG ATCTGGGCGC TCGACCTGCT GAACGACACG GTGCTGATCG CGCTGCTGCC GTCGGTCACG ATGCTCGTCG GCGCGACCGT GCTGCTCGGC ACGCACTGGC CGGTGATGGG GTTCGTCGTC GGCGCGGGCT CGCTGCTGTA CATCTCGGTG ACGGTCGCCG TGTCGCTCGG CATCGTCGCG CCGGCCGCGC GGCTCGGCAA CATGTGGGAC ACCCGCATGG GCGGCGCACT CGCGGACGCG GTGAGCTGCA ACGCGGTCGT CAAGGCGTTC GGCGCGGAAA CGCGCGAGGA AGCGCGGCTC GCGCGCGTGA TCGGCAAGTG GCGTCAGCGC ACGCGCCGCA CGTGGGTGCG CGGCACGCTC AACGGCGGGC TGCAGGGTGC GATGCTCGTC GCGATGCAGG CGGCGATGAT CGGCGTCGCG CTGCGGCTGT GGGCGAACGA CGAAGCGAGC GTCGGCGACA TCGCATTCTC GCTGACGATG TTCTTCATGC TGCAGGGCTA CCTGCGCGAC GTCGGCATGC ATATCCGCAA CCTGCAGCGC TCGGTCAACG ACATGGAAGA GCTCGTCGCG CTCGAGCGCC AGCCGCTCGG CATCGACGAT CGTCCCGGCG CGCCGGCCAT CCGGATCGGG CAAGGCGAGA TCCGCTTCGA GCACGTGACG TTCCGCTACG GCAATCATCC GGTACCGCTG TACGACGACT TCTCGATGCG CATCGCGCCC GGCGAGCGCG TGGGCCTCGT CGGTCATTCC GGGTCGGGCA AGACGACGTT CATCAAGCTG ATCCAGCGCC TGTACGACGT GTCGGGCGGC CGCATCACGA TCGACGGCCA GGACATCGCG CAGGTGCGGC AGGATTCGCT GCGCAGCCAG ATCGCGATCG TCCAGCAGGA GCCCGTGCTG TTCCACCGCA CGCTGGCGGA GAACATCGCG TATGCACGCC CCGACGCGAG CCGCGCGGAG ATCGAGCGCG CCGCGCGTCT GGCCAGCGCG CACGACTTCA TCGTCGCGCT GCCGGACGGC TATGACACGC TCGTCGGCGA GCGCGGGATC AAGCTGTCGG GCGGCGAACG CCAGCGCGTC GCGATCGCGC GTGCGTTCCT CGCGGATGCG CCGATCCTGA TCCTCGACGA AGCGACGTCG AGCCTCGACA GCGAAAGCGA GTTGCTGATC CAGCAGGCGA TGGAACGGCT GATGGTCGGC CGCACGACGC TCGTCGTCGC GCACCGGCTG TCGACGGTGC GCTCGCTCGA CCGCCTGCTC GTGCTCGATC GCGGCAAGGT GATCGAGGAA GGCAGCCACG ACGCGCTGAT CCGCATCGAC GGCGGCACAT ATCGCCGGTT GTTCGAGCGG CAGGCGCTGG AGCTGGCGAA AGGGCTCGCC GATTCGCCGC GGCGCCTCGC GGATCGCGAT GCCGGGCCGC TAGGGGAGCC GGCGAAGGTG TGA
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Protein sequence | MTRKTTHLGG QAFQAVFGFT FRYWRKQPVR IATITALALL GALADVLTPL FAGRLVDALS TGLTERAAAW HSALAAFGTL AALGIAATLL RQGVYLNIIT LTLKMMSEIA AASFHRVQRF STDWHANSFA GSTVRKITRG IWALDLLNDT VLIALLPSVT MLVGATVLLG THWPVMGFVV GAGSLLYISV TVAVSLGIVA PAARLGNMWD TRMGGALADA VSCNAVVKAF GAETREEARL ARVIGKWRQR TRRTWVRGTL NGGLQGAMLV AMQAAMIGVA LRLWANDEAS VGDIAFSLTM FFMLQGYLRD VGMHIRNLQR SVNDMEELVA LERQPLGIDD RPGAPAIRIG QGEIRFEHVT FRYGNHPVPL YDDFSMRIAP GERVGLVGHS GSGKTTFIKL IQRLYDVSGG RITIDGQDIA QVRQDSLRSQ IAIVQQEPVL FHRTLAENIA YARPDASRAE IERAARLASA HDFIVALPDG YDTLVGERGI KLSGGERQRV AIARAFLADA PILILDEATS SLDSESELLI QQAMERLMVG RTTLVVAHRL STVRSLDRLL VLDRGKVIEE GSHDALIRID GGTYRRLFER QALELAKGLA DSPRRLADRD AGPLGEPAKV
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