Gene Bamb_5489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5489 
Symbol 
ID4314378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2556050 
End bp2556514 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID638153331 
ProductMarR family transcriptional regulator 
Protein accessionYP_777370 
Protein GI115360232 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.914161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTTAT GCATATGCAC ATATAAATTG CCGTTCATGA ACGATATCCA GATCGCCCAG 
GCCTGCAATT GCCTCGCGCT GCGTCAGGCA GCGCGCTTCG TCACGCAACT CTACGAGCGG
CATCTGGCCC CGGTCGGTGT CACGCCCGCG CAGTTCTCGA TCATGGCGAA CCTGTCGCGC
CGGCCCGGCC TCGTGATGAG CGAGCTTGCC GATACGCTGG TGATGGACCG CACCACGCTG
TTGCGCGCGC TCAAGCCGCT GCAGCGCGAC GGCTTCGTCG CCGCGGCCGC GTCCGAGCAT
GACGCCCGCG CGCACGCGCT CAGCCTGACG AAGCTCGGCG AGCGCACCTA TGCGCAGGCG
AAAGTCGCGT GGCAGGCCGC GCAGGATGAG TTCGACACGC AGTTCGGCCG CGACCGCGCC
AAGGCGCTGC GCGACGAGTT GTTCAGCCTG ACGGCGCAGC GATAG
 
Protein sequence
MTLCICTYKL PFMNDIQIAQ ACNCLALRQA ARFVTQLYER HLAPVGVTPA QFSIMANLSR 
RPGLVMSELA DTLVMDRTTL LRALKPLQRD GFVAAAASEH DARAHALSLT KLGERTYAQA
KVAWQAAQDE FDTQFGRDRA KALRDELFSL TAQR