Gene Bamb_5487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5487 
Symbol 
ID4314376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2554518 
End bp2554949 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content69% 
IMG OID638153329 
ProductMarR family transcriptional regulator 
Protein accessionYP_777368 
Protein GI115360230 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.84256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACGA CCACCCTCAC CGATGACGAT TGCTTCGCGA TCCGGCAGGC CGCGCGGCGT 
ATCTCGCAGT TCTACGAACG CTATCTGTCG CGGGCGGGCG TCACGCCGTC GCAGTACAGC
ATTCTCGCGC TGCTGCGGGA GCGCCCGGGC CTGACGATGG CGACGCTGTC GGCGGTGCTG
GTGATCGAGC GCACGGCGCT CCTGCGCGCG CTCAAGCCGC TGATCGGCGC GGCGCTCGTC
ACGGGCCGGA TGGAGCCGCG TTGCCGCCGC CAGACGTTCG CGCTGACCGA GCACGGCGAA
GCCAGGATCG CCGACGCGCA TGTGCACTGG CTCGCCGCGC AGCAAGCGTT CGAGCAGCGG
TTCGGGTCGG CCCAGGCGGC CCGCCTCAGA GACGAATTGT TTCGGATTAC GCACAACCTG
CCGGAGCGCT AG
 
Protein sequence
MHTTTLTDDD CFAIRQAARR ISQFYERYLS RAGVTPSQYS ILALLRERPG LTMATLSAVL 
VIERTALLRA LKPLIGAALV TGRMEPRCRR QTFALTEHGE ARIADAHVHW LAAQQAFEQR
FGSAQAARLR DELFRITHNL PER