| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5486 |
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| Symbol | |
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| ID | 4314375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2553362 |
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| End bp | 2554453 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153328 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_777367 |
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| Protein GI | 115360229 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.707329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGA CCCAAGCCGC TGCTTCCCGC GAAGCAGCCA CAATCGACCC GCCCGCGAAG
CAGCAGCGCC GCGTGCCGTG GATGCGCATC GCGGTGGGCG CCGTGGTGGT CGTCGTGGCT
GCGGCCGCGC TCGACTGGCT GTTCGTGCTG CGCTTCCAGG AAAGCACCGA CGACGCATAT
GTCGGCGGCG ACGTCACCGT GCTCGCGCCG AAGGTGAACG GCTTCGTCGA CAAGATCCTC
GTGACCGACA ACCAGCGCGT GAAGGCCGGC GACGTGCTCG TGCAGCTCGA TGCGCGCGAC
TACGATGCGA AGCTCGCGCA GGCCGCCGCG GAAGTCGACA GCGCGCGCTC CGCGGTGACG
GAACTCGAAG CGAAGCAGCA GCTGCAATAC GCGGTGATCG GCCAGCATGC GGCGGACCGC
AATGCGTCAT CGGCCGAGCT CACGCGTGCG TCGTCCGACC GCGTGCGCTA CCGCGAGCTC
GTCAAATCCG ATGCGGTGTC GAACCAGATC GTCGAGCGCG CGGATGCCGA CTATTCGAAG
GCGGACGCGG CCGTCGCCCG CAGCGACGCC GCGCTGCTCG CGTCGAAGCG GCAGCTCGAC
GTGCTCGGCG CGCAACTCGC CGATGCGCGG GCCCGCGTGA ACACGGCGCT CGCCGCGCAA
CGCGTCGCGG CGCTGAACGT CGAATACACG ACGATCCGCT CGCCGGTCGA CGGCTACGTC
GGCAACCGTA CGAGCCGCGT CGGGATGCTC GCGAATGTCG GCGTGCCGCT GCTGACGGTC
GTGCCCGCGT CGGGGCTGTG GATCGACGCG AACTTCAAGG AAGACCAGCT GCGCAAGATG
CGCGCGGGCG ATCGCGTCGA CGTCACGCTC GATGCGTCGA GCACGCGCCT GCACGGCCGC
GTCGACAGCC TCGCGCCCGC GACCGGCGCG ACCTTCAGCG TGCTGCCGCC CGAGAACGCG
ACCGGCAACT TCACGAAGAT CGTCCAGCGC GTGCCGGTGC GCGTGCATCT CGATCCGCAG
CCGGGCCTCG AGCACGTGCT GCGCCCCGGC CTGTCCGCGG CCGTCACGGT GCACACCGAC
CACGCGAACT GA
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| Protein sequence | METTQAAASR EAATIDPPAK QQRRVPWMRI AVGAVVVVVA AAALDWLFVL RFQESTDDAY
VGGDVTVLAP KVNGFVDKIL VTDNQRVKAG DVLVQLDARD YDAKLAQAAA EVDSARSAVT
ELEAKQQLQY AVIGQHAADR NASSAELTRA SSDRVRYREL VKSDAVSNQI VERADADYSK
ADAAVARSDA ALLASKRQLD VLGAQLADAR ARVNTALAAQ RVAALNVEYT TIRSPVDGYV
GNRTSRVGML ANVGVPLLTV VPASGLWIDA NFKEDQLRKM RAGDRVDVTL DASSTRLHGR
VDSLAPATGA TFSVLPPENA TGNFTKIVQR VPVRVHLDPQ PGLEHVLRPG LSAAVTVHTD
HAN
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